Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFERP55789 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.35■□□□□ 0.69
GFERP55789 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFERP55789 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
GFERP55789 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFERP55789 AC124016.1-201ENST00000609552 612 ntBASIC19.35■□□□□ 0.69
GFERP55789 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.35■□□□□ 0.69
GFERP55789 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.35■□□□□ 0.69
GFERP55789 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
GFERP55789 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFERP55789 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GFERP55789 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
GFERP55789 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
GFERP55789 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GFERP55789 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GFERP55789 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GFERP55789 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GFERP55789 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
GFERP55789 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GFERP55789 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GFERP55789 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
GFERP55789 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.34■□□□□ 0.69
GFERP55789 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
GFERP55789 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.34■□□□□ 0.69
GFERP55789 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.34■□□□□ 0.69
GFERP55789 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.34■□□□□ 0.69
GFERP55789 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GFERP55789 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.34■□□□□ 0.69
GFERP55789 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GFERP55789 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GFERP55789 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.34■□□□□ 0.69
GFERP55789 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.33■□□□□ 0.69
GFERP55789 AC006128.1-201ENST00000624704 1661 ntBASIC19.33■□□□□ 0.69
GFERP55789 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GFERP55789 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
GFERP55789 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GFERP55789 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GFERP55789 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GFERP55789 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.33■□□□□ 0.68
GFERP55789 KRASP1-201ENST00000407852 552 ntBASIC19.33■□□□□ 0.68
GFERP55789 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GFERP55789 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.33■□□□□ 0.68
GFERP55789 Z99916.2-201ENST00000604037 246 ntBASIC19.33■□□□□ 0.68
GFERP55789 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GFERP55789 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GFERP55789 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
GFERP55789 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.33■□□□□ 0.68
GFERP55789 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GFERP55789 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GFERP55789 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GFERP55789 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GFERP55789 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.32■□□□□ 0.68
GFERP55789 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
GFERP55789 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
GFERP55789 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GFERP55789 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GFERP55789 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GFERP55789 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
GFERP55789 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.32■□□□□ 0.68
GFERP55789 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
GFERP55789 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.32■□□□□ 0.68
GFERP55789 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.32■□□□□ 0.68
GFERP55789 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GFERP55789 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GFERP55789 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.32■□□□□ 0.68
GFERP55789 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
GFERP55789 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GFERP55789 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
GFERP55789 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GFERP55789 PTBP1P-201ENST00000554374 1601 ntBASIC19.32■□□□□ 0.68
GFERP55789 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GFERP55789 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GFERP55789 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
GFERP55789 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GFERP55789 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
GFERP55789 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.31■□□□□ 0.68
GFERP55789 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.31■□□□□ 0.68
GFERP55789 MIR718-201ENST00000390190 70 ntBASIC19.31■□□□□ 0.68
GFERP55789 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.31■□□□□ 0.68
GFERP55789 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.31■□□□□ 0.68
GFERP55789 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.31■□□□□ 0.68
GFERP55789 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GFERP55789 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
GFERP55789 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GFERP55789 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
GFERP55789 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GFERP55789 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
GFERP55789 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GFERP55789 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GFERP55789 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.3■□□□□ 0.68
GFERP55789 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GFERP55789 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.3■□□□□ 0.68
GFERP55789 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.3■□□□□ 0.68
GFERP55789 AC133681.1-201ENST00000465482 601 ntBASIC19.3■□□□□ 0.68
GFERP55789 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.3■□□□□ 0.68
GFERP55789 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.3■□□□□ 0.68
GFERP55789 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.3■□□□□ 0.68
GFERP55789 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.3■□□□□ 0.68
GFERP55789 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.3■□□□□ 0.68
GFERP55789 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms