Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CDH11P55287 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH11P55287 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH11P55287 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH11P55287 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH11P55287 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
CDH11P55287 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.42■□□□□ 0.54
CDH11P55287 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH11P55287 AC006970.2-201ENST00000450065 779 ntBASIC18.42■□□□□ 0.54
CDH11P55287 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH11P55287 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.42■□□□□ 0.54
CDH11P55287 EEF1DP3-203ENST00000566025 782 ntBASIC18.42■□□□□ 0.54
CDH11P55287 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.42■□□□□ 0.54
CDH11P55287 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH11P55287 RAP2CP1-201ENST00000605103 478 ntBASIC18.42■□□□□ 0.54
CDH11P55287 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH11P55287 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH11P55287 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CDH11P55287 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CDH11P55287 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH11P55287 TCF3P1-201ENST00000423021 1937 ntBASIC18.41■□□□□ 0.54
CDH11P55287 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH11P55287 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH11P55287 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH11P55287 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH11P55287 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH11P55287 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH11P55287 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH11P55287 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH11P55287 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH11P55287 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH11P55287 AP001160.3-201ENST00000601484 763 ntBASIC18.41■□□□□ 0.54
CDH11P55287 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH11P55287 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH11P55287 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH11P55287 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CDH11P55287 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.41■□□□□ 0.54
CDH11P55287 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH11P55287 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH11P55287 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH11P55287 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CDH11P55287 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH11P55287 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH11P55287 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH11P55287 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH11P55287 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH11P55287 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH11P55287 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CDH11P55287 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH11P55287 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH11P55287 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH11P55287 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH11P55287 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH11P55287 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH11P55287 HLA-L-209ENST00000420110 1011 ntBASIC18.4■□□□□ 0.54
CDH11P55287 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH11P55287 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH11P55287 UBE2DNL-204ENST00000602536 740 ntBASIC18.4■□□□□ 0.54
CDH11P55287 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH11P55287 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH11P55287 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH11P55287 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH11P55287 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH11P55287 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH11P55287 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDH11P55287 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.39■□□□□ 0.53
CDH11P55287 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.39■□□□□ 0.53
CDH11P55287 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.39■□□□□ 0.53
CDH11P55287 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.39■□□□□ 0.53
CDH11P55287 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.39■□□□□ 0.53
CDH11P55287 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.39■□□□□ 0.53
CDH11P55287 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.39■□□□□ 0.53
CDH11P55287 MFSD11-216ENST00000590393 1141 ntBASIC18.39■□□□□ 0.53
CDH11P55287 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.39■□□□□ 0.53
CDH11P55287 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.39■□□□□ 0.53
CDH11P55287 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH11P55287 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH11P55287 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH11P55287 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.39■□□□□ 0.53
CDH11P55287 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
CDH11P55287 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH11P55287 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CDH11P55287 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CDH11P55287 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH11P55287 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH11P55287 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CDH11P55287 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDH11P55287 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH11P55287 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH11P55287 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CDH11P55287 MIR663A-201ENST00000385250 93 ntBASIC18.38■□□□□ 0.53
CDH11P55287 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.38■□□□□ 0.53
CDH11P55287 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.38■□□□□ 0.53
CDH11P55287 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.38■□□□□ 0.53
CDH11P55287 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH11P55287 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH11P55287 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH11P55287 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH11P55287 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH11P55287 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms