Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NR1H2P55055 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.04■□□□□ 0.64
NR1H2P55055 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NR1H2P55055 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NR1H2P55055 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NR1H2P55055 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.04■□□□□ 0.64
NR1H2P55055 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.04■□□□□ 0.64
NR1H2P55055 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.04■□□□□ 0.64
NR1H2P55055 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NR1H2P55055 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NR1H2P55055 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NR1H2P55055 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.04■□□□□ 0.64
NR1H2P55055 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NR1H2P55055 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
NR1H2P55055 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NR1H2P55055 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NR1H2P55055 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
NR1H2P55055 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.04■□□□□ 0.64
NR1H2P55055 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NR1H2P55055 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.04■□□□□ 0.64
NR1H2P55055 KRT18P14-201ENST00000534205 1250 ntBASIC19.04■□□□□ 0.64
NR1H2P55055 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NR1H2P55055 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.04■□□□□ 0.64
NR1H2P55055 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.04■□□□□ 0.64
NR1H2P55055 TERF1P2-201ENST00000583350 1212 ntBASIC19.04■□□□□ 0.64
NR1H2P55055 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NR1H2P55055 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.04■□□□□ 0.64
NR1H2P55055 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.04■□□□□ 0.64
NR1H2P55055 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.04■□□□□ 0.64
NR1H2P55055 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NR1H2P55055 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NR1H2P55055 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NR1H2P55055 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H2P55055 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
NR1H2P55055 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H2P55055 AC121338.2-201ENST00000622535 1744 ntBASIC19.03■□□□□ 0.64
NR1H2P55055 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
NR1H2P55055 AL158211.5-201ENST00000623583 2518 ntBASIC19.03■□□□□ 0.64
NR1H2P55055 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.03■□□□□ 0.64
NR1H2P55055 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H2P55055 OR7E47P-201ENST00000546390 1422 ntBASIC19.03■□□□□ 0.64
NR1H2P55055 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H2P55055 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H2P55055 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
NR1H2P55055 RARRES2P11-201ENST00000635158 484 ntBASIC19.03■□□□□ 0.64
NR1H2P55055 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NR1H2P55055 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H2P55055 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H2P55055 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NR1H2P55055 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H2P55055 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H2P55055 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H2P55055 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NR1H2P55055 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NR1H2P55055 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NR1H2P55055 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.02■□□□□ 0.64
NR1H2P55055 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NR1H2P55055 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
NR1H2P55055 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NR1H2P55055 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NR1H2P55055 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NR1H2P55055 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NR1H2P55055 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.02■□□□□ 0.64
NR1H2P55055 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NR1H2P55055 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NR1H2P55055 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NR1H2P55055 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NR1H2P55055 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.02■□□□□ 0.64
NR1H2P55055 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
NR1H2P55055 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
NR1H2P55055 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.02■□□□□ 0.64
NR1H2P55055 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.02■□□□□ 0.64
NR1H2P55055 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NR1H2P55055 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
NR1H2P55055 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NR1H2P55055 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NR1H2P55055 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NR1H2P55055 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
NR1H2P55055 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H2P55055 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H2P55055 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H2P55055 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NR1H2P55055 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.01■□□□□ 0.63
NR1H2P55055 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.01■□□□□ 0.63
NR1H2P55055 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H2P55055 NTF6G-201ENST00000591094 616 ntBASIC19.01■□□□□ 0.63
NR1H2P55055 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.01■□□□□ 0.63
NR1H2P55055 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H2P55055 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H2P55055 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H2P55055 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
NR1H2P55055 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H2P55055 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.01■□□□□ 0.63
NR1H2P55055 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.01■□□□□ 0.63
NR1H2P55055 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H2P55055 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NR1H2P55055 AC125437.2-201ENST00000625180 2167 ntBASIC19■□□□□ 0.63
NR1H2P55055 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H2P55055 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19■□□□□ 0.63
NR1H2P55055 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms