Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PSMD4P55036 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.75■□□□□ 0.59
PSMD4P55036 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.74■□□□□ 0.59
PSMD4P55036 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PSMD4P55036 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
PSMD4P55036 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PSMD4P55036 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
PSMD4P55036 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.74■□□□□ 0.59
PSMD4P55036 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PSMD4P55036 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.74■□□□□ 0.59
PSMD4P55036 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.74■□□□□ 0.59
PSMD4P55036 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.74■□□□□ 0.59
PSMD4P55036 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PSMD4P55036 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PSMD4P55036 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PSMD4P55036 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.74■□□□□ 0.59
PSMD4P55036 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.74■□□□□ 0.59
PSMD4P55036 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.74■□□□□ 0.59
PSMD4P55036 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.74■□□□□ 0.59
PSMD4P55036 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
PSMD4P55036 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PSMD4P55036 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PSMD4P55036 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.74■□□□□ 0.59
PSMD4P55036 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PSMD4P55036 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
PSMD4P55036 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PSMD4P55036 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.73■□□□□ 0.59
PSMD4P55036 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PSMD4P55036 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PSMD4P55036 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PSMD4P55036 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.73■□□□□ 0.59
PSMD4P55036 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PSMD4P55036 SLC29A4P1-201ENST00000398760 971 ntBASIC18.73■□□□□ 0.59
PSMD4P55036 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.73■□□□□ 0.59
PSMD4P55036 AC093787.1-201ENST00000450396 207 ntBASIC18.73■□□□□ 0.59
PSMD4P55036 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.73■□□□□ 0.59
PSMD4P55036 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.73■□□□□ 0.59
PSMD4P55036 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.73■□□□□ 0.59
PSMD4P55036 AL050303.2-201ENST00000619798 666 ntBASIC18.73■□□□□ 0.59
PSMD4P55036 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.73■□□□□ 0.59
PSMD4P55036 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PSMD4P55036 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PSMD4P55036 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PSMD4P55036 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.73■□□□□ 0.59
PSMD4P55036 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PSMD4P55036 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.73■□□□□ 0.59
PSMD4P55036 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
PSMD4P55036 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PSMD4P55036 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PSMD4P55036 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.73■□□□□ 0.59
PSMD4P55036 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PSMD4P55036 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PSMD4P55036 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PSMD4P55036 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PSMD4P55036 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PSMD4P55036 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PSMD4P55036 GPX1P1-201ENST00000388829 606 ntBASIC18.72■□□□□ 0.59
PSMD4P55036 LSM12P1-201ENST00000411836 588 ntBASIC18.72■□□□□ 0.59
PSMD4P55036 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.72■□□□□ 0.59
PSMD4P55036 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.72■□□□□ 0.59
PSMD4P55036 AC083906.2-201ENST00000511578 360 ntBASIC18.72■□□□□ 0.59
PSMD4P55036 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PSMD4P55036 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PSMD4P55036 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.72■□□□□ 0.59
PSMD4P55036 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PSMD4P55036 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.72■□□□□ 0.59
PSMD4P55036 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PSMD4P55036 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PSMD4P55036 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.72■□□□□ 0.59
PSMD4P55036 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PSMD4P55036 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.72■□□□□ 0.59
PSMD4P55036 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PSMD4P55036 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.71■□□□□ 0.59
PSMD4P55036 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PSMD4P55036 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PSMD4P55036 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PSMD4P55036 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.71■□□□□ 0.59
PSMD4P55036 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PSMD4P55036 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PSMD4P55036 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PSMD4P55036 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.71■□□□□ 0.59
PSMD4P55036 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.71■□□□□ 0.59
PSMD4P55036 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PSMD4P55036 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PSMD4P55036 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.71■□□□□ 0.59
PSMD4P55036 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.71■□□□□ 0.59
PSMD4P55036 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.71■□□□□ 0.59
PSMD4P55036 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.71■□□□□ 0.59
PSMD4P55036 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PSMD4P55036 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.71■□□□□ 0.59
PSMD4P55036 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PSMD4P55036 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PSMD4P55036 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PSMD4P55036 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PSMD4P55036 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PSMD4P55036 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PSMD4P55036 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.7■□□□□ 0.58
PSMD4P55036 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PSMD4P55036 RNF165-205ENST00000588679 2904 ntBASIC18.7■□□□□ 0.58
PSMD4P55036 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms