Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 LINC01006-201ENST00000333319 2292 ntBASIC20.51■□□□□ 0.87
ATXN3P54252 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3P54252 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3P54252 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3P54252 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3P54252 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.51■□□□□ 0.87
ATXN3P54252 MIR1224-201ENST00000408193 85 ntBASIC20.51■□□□□ 0.87
ATXN3P54252 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ATXN3P54252 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ATXN3P54252 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.51■□□□□ 0.87
ATXN3P54252 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ATXN3P54252 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.51■□□□□ 0.87
ATXN3P54252 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.51■□□□□ 0.87
ATXN3P54252 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ATXN3P54252 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.51■□□□□ 0.87
ATXN3P54252 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3P54252 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN3P54252 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.51■□□□□ 0.87
ATXN3P54252 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ATXN3P54252 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ATXN3P54252 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ATXN3P54252 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN3P54252 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.5■□□□□ 0.87
ATXN3P54252 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
ATXN3P54252 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN3P54252 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN3P54252 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
ATXN3P54252 SNORA78-201ENST00000459373 127 ntBASIC20.5■□□□□ 0.87
ATXN3P54252 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.5■□□□□ 0.87
ATXN3P54252 REXO1L12P-201ENST00000622156 912 ntBASIC20.5■□□□□ 0.87
ATXN3P54252 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN3P54252 LINC01521-201ENST00000504184 1943 ntBASIC20.5■□□□□ 0.87
ATXN3P54252 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
ATXN3P54252 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.5■□□□□ 0.87
ATXN3P54252 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN3P54252 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.5■□□□□ 0.87
ATXN3P54252 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN3P54252 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ATXN3P54252 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3P54252 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
ATXN3P54252 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3P54252 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3P54252 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3P54252 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.49■□□□□ 0.87
ATXN3P54252 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3P54252 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3P54252 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3P54252 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3P54252 MCRIP2P1-201ENST00000394346 511 ntBASIC20.49■□□□□ 0.87
ATXN3P54252 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ATXN3P54252 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3P54252 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.49■□□□□ 0.87
ATXN3P54252 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3P54252 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.49■□□□□ 0.87
ATXN3P54252 RN7SL471P-201ENST00000580476 299 ntBASIC20.49■□□□□ 0.87
ATXN3P54252 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.49■□□□□ 0.87
ATXN3P54252 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.49■□□□□ 0.87
ATXN3P54252 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3P54252 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3P54252 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.49■□□□□ 0.87
ATXN3P54252 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3P54252 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.49■□□□□ 0.87
ATXN3P54252 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3P54252 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3P54252 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN3P54252 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3P54252 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.48■□□□□ 0.87
ATXN3P54252 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3P54252 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3P54252 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3P54252 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3P54252 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3P54252 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.48■□□□□ 0.87
ATXN3P54252 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.48■□□□□ 0.87
ATXN3P54252 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3P54252 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ATXN3P54252 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.48■□□□□ 0.87
ATXN3P54252 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3P54252 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3P54252 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3P54252 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.48■□□□□ 0.87
ATXN3P54252 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3P54252 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ATXN3P54252 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3P54252 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3P54252 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3P54252 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATXN3P54252 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.47■□□□□ 0.87
ATXN3P54252 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
ATXN3P54252 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATXN3P54252 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATXN3P54252 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATXN3P54252 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATXN3P54252 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATXN3P54252 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATXN3P54252 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.47■□□□□ 0.87
ATXN3P54252 FAM210CP-201ENST00000445714 574 ntBASIC20.47■□□□□ 0.87
ATXN3P54252 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.47■□□□□ 0.87
ATXN3P54252 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATXN3P54252 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms