Protein–RNA interactions for Protein: P53617

NRD1, Protein NRD1, yeastyeast

Known RBP RIP-Chip data

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NRD1P53617 PRP5YBR237W 2550 nt2.89□□□□□ -1.95
NRD1P53617 GIS1YDR096W 2685 nt2.88□□□□□ -1.95 RIP-Chip
NRD1P53617 RIF1YBR275C 5751 nt2.88□□□□□ -1.95
NRD1P53617 SMY2YBR172C 2223 nt2.88□□□□□ -1.95
NRD1P53617 SLM1YIL105C 2061 nt2.88□□□□□ -1.95
NRD1P53617 MAD1YGL086W 2250 nt2.88□□□□□ -1.95
NRD1P53617 NIP100YPL174C 2607 nt2.88□□□□□ -1.95
NRD1P53617 YOL164W-AYOL164W-A 183 nt2.88□□□□□ -1.95
NRD1P53617 IRC8YJL051W 2469 nt2.88□□□□□ -1.95
NRD1P53617 ASE1YOR058C 2658 nt2.88□□□□□ -1.95
NRD1P53617 LEU3YLR451W 2661 nt2.87□□□□□ -1.95
NRD1P53617 RPS25BYLR333C 327 nt2.87□□□□□ -1.95 RIP-Chip
NRD1P53617 YBL100W-CYBL100W-C 120 nt2.87□□□□□ -1.95
NRD1P53617 RPS30BYOR182C 192 nt2.87□□□□□ -1.95
NRD1P53617 ORC3YLL004W 1851 nt2.87□□□□□ -1.95
NRD1P53617 KHA1YJL094C 2622 nt2.87□□□□□ -1.95
NRD1P53617 ITC1YGL133W 3795 nt2.86□□□□□ -1.95
NRD1P53617 SOK1YDR006C 2706 nt2.86□□□□□ -1.95
NRD1P53617 VBA4YDR119W 2307 nt2.86□□□□□ -1.95 RIP-Chip
NRD1P53617 HMI1YOL095C 2121 nt2.86□□□□□ -1.95
NRD1P53617 YIL082W-AYIL082W-A 4497 nt2.86□□□□□ -1.95
NRD1P53617 FMP16YDR070C 282 nt2.86□□□□□ -1.95
NRD1P53617 YIL080WYIL080W 4722 nt2.86□□□□□ -1.95
NRD1P53617 PFF1YBR074W 2931 nt2.86□□□□□ -1.95
NRD1P53617 UBP14YBR058C 2346 nt2.85□□□□□ -1.95
NRD1P53617 YCR043CYCR043C 384 nt2.85□□□□□ -1.95
NRD1P53617 SCH9YHR205W 2475 nt2.85□□□□□ -1.95
NRD1P53617 GIN4YDR507C 3429 nt2.85□□□□□ -1.95
NRD1P53617 SKP2YNL311C 2292 nt2.85□□□□□ -1.95
NRD1P53617 STB6YKL072W 2301 nt2.85□□□□□ -1.95
NRD1P53617 RFX1YLR176C 2436 nt2.84□□□□□ -1.95
NRD1P53617 BPT1YLL015W 4680 nt2.84□□□□□ -1.95
NRD1P53617 PSO2YMR137C 1986 nt2.84□□□□□ -1.95
NRD1P53617 MNE1YOR350C 1992 nt2.84□□□□□ -1.95
NRD1P53617 PHO81YGR233C 3537 nt2.84□□□□□ -1.95
NRD1P53617 YCG1YDR325W 3108 nt2.84□□□□□ -1.96
NRD1P53617 NUP120YKL057C 3114 nt2.84□□□□□ -1.96
NRD1P53617 EDS1YBR033W 2760 nt2.83□□□□□ -1.96
NRD1P53617 YDL206WYDL206W 2289 nt2.83□□□□□ -1.96
NRD1P53617 RPL42AYNL162W 321 nt2.83□□□□□ -1.96
NRD1P53617 COG6YNL041C 2520 nt2.83□□□□□ -1.96
NRD1P53617 ORC1YML065W 2745 nt2.83□□□□□ -1.96
NRD1P53617 VPH1YOR270C 2523 nt2.82□□□□□ -1.96
NRD1P53617 NOP9YJL010C 2001 nt2.82□□□□□ -1.96
NRD1P53617 MSC6YOR354C 2079 nt2.82□□□□□ -1.96
NRD1P53617 COX12YLR038C 252 nt2.82□□□□□ -1.96
NRD1P53617 YBL012CYBL012C 402 nt2.82□□□□□ -1.96
NRD1P53617 RPS23BYPR132W 438 nt2.82□□□□□ -1.96
NRD1P53617 VPS34YLR240W 2628 nt2.81□□□□□ -1.96 RIP-Chip
NRD1P53617 RAX2YLR084C 3663 nt2.81□□□□□ -1.96
NRD1P53617 snR47snR47 99 nt2.81□□□□□ -1.96
NRD1P53617 DIA2YOR080W 2199 nt2.81□□□□□ -1.96
NRD1P53617 YPL216WYPL216W 3309 nt2.81□□□□□ -1.96
NRD1P53617 RSN1YMR266W 2862 nt2.8□□□□□ -1.96
NRD1P53617 YJL070CYJL070C 2667 nt2.8□□□□□ -1.96
NRD1P53617 BNI4YNL233W 2679 nt2.8□□□□□ -1.96
NRD1P53617 PXA2YKL188C 2562 nt2.8□□□□□ -1.96
NRD1P53617 BCH1YMR237W 2175 nt2.8□□□□□ -1.96
NRD1P53617 21S_rRNA21S_rRNA 3296 nt2.8□□□□□ -1.96
NRD1P53617 TFC4YGR047C 3078 nt2.8□□□□□ -1.96
NRD1P53617 MAK10YEL053C 2202 nt2.8□□□□□ -1.96
NRD1P53617 RPS12YOR369C 432 nt2.79□□□□□ -1.96
NRD1P53617 TFC1YBR123C 1950 nt2.79□□□□□ -1.96
NRD1P53617 SVL3YPL032C 2478 nt2.79□□□□□ -1.96
NRD1P53617 YGR067CYGR067C 2415 nt2.78□□□□□ -1.96
NRD1P53617 MSH2YOL090W 2895 nt2.78□□□□□ -1.96
NRD1P53617 SET1YHR119W 3243 nt2.78□□□□□ -1.96
NRD1P53617 NMA111YNL123W 2994 nt2.78□□□□□ -1.96
NRD1P53617 YAT2YER024W 2772 nt2.78□□□□□ -1.97
NRD1P53617 HFM1YGL251C 3564 nt2.77□□□□□ -1.97
NRD1P53617 DUF1YOL087C 3351 nt2.77□□□□□ -1.97
NRD1P53617 PIP2YOR363C 2991 nt2.77□□□□□ -1.97
NRD1P53617 NPR1YNL183C 2373 nt2.77□□□□□ -1.97
NRD1P53617 YNL114CYNL114C 372 nt2.77□□□□□ -1.97
NRD1P53617 VMA9YCL005W-A 222 nt2.77□□□□□ -1.97 RIP-Chip
NRD1P53617 SIP3YNL257C 3690 nt2.76□□□□□ -1.97
NRD1P53617 SNF5YBR289W 2718 nt2.76□□□□□ -1.97
NRD1P53617 SWI6YLR182W 2412 nt2.76□□□□□ -1.97
NRD1P53617 YOR108C-AYOR108C-A 210 nt2.76□□□□□ -1.97
NRD1P53617 GRR1YJR090C 3456 nt2.76□□□□□ -1.97
NRD1P53617 EXO84YBR102C 2262 nt2.76□□□□□ -1.97
NRD1P53617 URB2YJR041C 3525 nt2.76□□□□□ -1.97
NRD1P53617 RAD5YLR032W 3510 nt2.76□□□□□ -1.97
NRD1P53617 TSC11YER093C 4293 nt2.76□□□□□ -1.97
NRD1P53617 TOM1YDR457W 9807 nt2.76□□□□□ -1.97
NRD1P53617 ESL1YIL151C 3357 nt2.75□□□□□ -1.97
NRD1P53617 CHS3YBR023C 3498 nt2.75□□□□□ -1.97
NRD1P53617 YPL150WYPL150W 2706 nt2.75□□□□□ -1.97
NRD1P53617 BIR1YJR089W 2865 nt2.75□□□□□ -1.97
NRD1P53617 MYO5YMR109W 3660 nt2.74□□□□□ -1.97
NRD1P53617 MAK21YDR060W 3078 nt2.74□□□□□ -1.97
NRD1P53617 RPS22AYJL190C 393 nt2.74□□□□□ -1.97 RIP-Chip
NRD1P53617 YLR146W-AYLR146W-A 189 nt2.74□□□□□ -1.97
NRD1P53617 VPS3YDR495C 3036 nt2.74□□□□□ -1.97
NRD1P53617 YIL002W-AYIL002W-A 210 nt2.73□□□□□ -1.97
NRD1P53617 YLR286W-AYLR286W-A 135 nt2.73□□□□□ -1.97
NRD1P53617 ROM1YGR070W 3468 nt2.73□□□□□ -1.97
NRD1P53617 BRE1YDL074C 2103 nt2.72□□□□□ -1.97
NRD1P53617 AXL1YPR122W 3627 nt2.72□□□□□ -1.97
NRD1P53617 FLO11YIR019C 4104 nt2.71□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 29.4 ms