Protein–RNA interactions for Protein: P49954

NIT3, Omega-amidase NIT3, yeastyeast

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIT3P49954 SLY1YDR189W 2001 nt2.39□□□□□ -2.03
NIT3P49954 YHR071C-AYHR071C-A 321 nt2.39□□□□□ -2.03
NIT3P49954 YJL182CYJL182C 318 nt2.39□□□□□ -2.03
NIT3P49954 YOR011W-AYOR011W-A 207 nt2.39□□□□□ -2.03
NIT3P49954 TRA1YHR099W 11235 nt2.39□□□□□ -2.03
NIT3P49954 CYR1YJL005W 6081 nt2.39□□□□□ -2.03
NIT3P49954 ZRG17YNR039C 1818 nt2.38□□□□□ -2.03
NIT3P49954 SRO77YBL106C 3033 nt2.38□□□□□ -2.03
NIT3P49954 YDR003W-AYDR003W-A 123 nt2.38□□□□□ -2.03
NIT3P49954 CLN3YAL040C 1743 nt2.37□□□□□ -2.03
NIT3P49954 ESL2YKR096W 3588 nt2.37□□□□□ -2.03
NIT3P49954 YDL185C-AYDL185C-A 228 nt2.37□□□□□ -2.03
NIT3P49954 YLR466C-BYLR466C-B 117 nt2.37□□□□□ -2.03
NIT3P49954 SPO75YLL005C 2607 nt2.37□□□□□ -2.03
NIT3P49954 YIL082W-AYIL082W-A 4497 nt2.36□□□□□ -2.03
NIT3P49954 YPL150WYPL150W 2706 nt2.36□□□□□ -2.03
NIT3P49954 ENV11YGR071C 2583 nt2.35□□□□□ -2.03
NIT3P49954 YOL160WYOL160W 342 nt2.35□□□□□ -2.03
NIT3P49954 RAV1YJR033C 4074 nt2.35□□□□□ -2.03
NIT3P49954 HSH155YMR288W 2916 nt2.35□□□□□ -2.03
NIT3P49954 RTT107YHR154W 3213 nt2.35□□□□□ -2.03
NIT3P49954 PUT3YKL015W 2940 nt2.35□□□□□ -2.03
NIT3P49954 BCK1YJL095W 4437 nt2.34□□□□□ -2.03
NIT3P49954 YER088C-AYER088C-A 324 nt2.34□□□□□ -2.03
NIT3P49954 RRT15YLR162W-A 189 nt2.34□□□□□ -2.03
NIT3P49954 YPR092WYPR092W 306 nt2.34□□□□□ -2.03
NIT3P49954 UBP15YMR304W 3693 nt2.34□□□□□ -2.04
NIT3P49954 SMC6YLR383W 3345 nt2.33□□□□□ -2.04
NIT3P49954 MLH1YMR167W 2310 nt2.33□□□□□ -2.04
NIT3P49954 VPS55YJR044C 423 nt2.33□□□□□ -2.04
NIT3P49954 GIP3YPL137C 3831 nt2.33□□□□□ -2.04
NIT3P49954 YPR097WYPR097W 3222 nt2.32□□□□□ -2.04
NIT3P49954 DNA2YHR164C 4569 nt2.32□□□□□ -2.04
NIT3P49954 NOP14YDL148C 2433 nt2.32□□□□□ -2.04
NIT3P49954 snR74snR74 88 nt2.32□□□□□ -2.04
NIT3P49954 TRL1YJL087C 2484 nt2.32□□□□□ -2.04
NIT3P49954 YDR098C-BYDR098C-B 5268 nt2.32□□□□□ -2.04
NIT3P49954 YDR210C-DYDR210C-D 5268 nt2.32□□□□□ -2.04
NIT3P49954 YDR316W-BYDR316W-B 5268 nt2.32□□□□□ -2.04
NIT3P49954 YDR365W-BYDR365W-B 5268 nt2.32□□□□□ -2.04
NIT3P49954 YER138CYER138C 5268 nt2.32□□□□□ -2.04
NIT3P49954 YER160CYER160C 5268 nt2.32□□□□□ -2.04
NIT3P49954 YGR038C-BYGR038C-B 5268 nt2.32□□□□□ -2.04
NIT3P49954 YGR161C-DYGR161C-D 5268 nt2.32□□□□□ -2.04
NIT3P49954 YJR027WYJR027W 5268 nt2.32□□□□□ -2.04
NIT3P49954 YLR157C-BYLR157C-B 5268 nt2.32□□□□□ -2.04
NIT3P49954 YML039WYML039W 5268 nt2.32□□□□□ -2.04
NIT3P49954 YML045WYML045W 5268 nt2.32□□□□□ -2.04
NIT3P49954 YMR050CYMR050C 5268 nt2.32□□□□□ -2.04
NIT3P49954 YOL103W-BYOL103W-B 5268 nt2.32□□□□□ -2.04
NIT3P49954 YBR012W-BYBR012W-B 5271 nt2.32□□□□□ -2.04
NIT3P49954 YOR142W-BYOR142W-B 5268 nt2.32□□□□□ -2.04
NIT3P49954 YPL257W-BYPL257W-B 5268 nt2.32□□□□□ -2.04
NIT3P49954 YPR158W-BYPR158W-B 5271 nt2.32□□□□□ -2.04
NIT3P49954 RSE1YML049C 4086 nt2.32□□□□□ -2.04
NIT3P49954 YDR341CYDR341C 1824 nt2.31□□□□□ -2.04
NIT3P49954 YRB1YDR002W 606 nt2.31□□□□□ -2.04
NIT3P49954 YBL012CYBL012C 402 nt2.31□□□□□ -2.04
NIT3P49954 EDS1YBR033W 2760 nt2.3□□□□□ -2.04
NIT3P49954 SEC26YDR238C 2922 nt2.3□□□□□ -2.04
NIT3P49954 NAM7YMR080C 2916 nt2.3□□□□□ -2.04
NIT3P49954 YCR102W-AYCR102W-A 198 nt2.3□□□□□ -2.04
NIT3P49954 MRP10YDL045W-A 288 nt2.3□□□□□ -2.04
NIT3P49954 SRP14YDL092W 441 nt2.3□□□□□ -2.04
NIT3P49954 YGR151CYGR151C 336 nt2.3□□□□□ -2.04
NIT3P49954 TOF1YNL273W 3717 nt2.3□□□□□ -2.04
NIT3P49954 MSH5YDL154W 2706 nt2.29□□□□□ -2.04
NIT3P49954 RPS27BYHR021C 249 nt2.29□□□□□ -2.04
NIT3P49954 YIR030W-AYIR030W-A 384 nt2.29□□□□□ -2.04
NIT3P49954 YNL097C-BYNL097C-B 123 nt2.29□□□□□ -2.04
NIT3P49954 SGF11YPL047W 300 nt2.29□□□□□ -2.04
NIT3P49954 NUM1YDR150W 8247 nt2.29□□□□□ -2.04
NIT3P49954 CAT2YML042W 2013 nt2.29□□□□□ -2.04
NIT3P49954 TFC8YPL007C 1767 nt2.28□□□□□ -2.04
NIT3P49954 TIM9YEL020W-A 264 nt2.28□□□□□ -2.04
NIT3P49954 YJL150WYJL150W 303 nt2.28□□□□□ -2.04
NIT3P49954 YKR075W-AYKR075W-A 270 nt2.28□□□□□ -2.04
NIT3P49954 YMR242W-AYMR242W-A 90 nt2.28□□□□□ -2.04
NIT3P49954 NAB6YML117W 3405 nt2.28□□□□□ -2.04
NIT3P49954 SYH1YPL105C 2550 nt2.28□□□□□ -2.04
NIT3P49954 SEC5YDR166C 2916 nt2.28□□□□□ -2.05
NIT3P49954 OLI1Q0130 231 nt2.27□□□□□ -2.05
NIT3P49954 YJL120WYJL120W 324 nt2.27□□□□□ -2.05
NIT3P49954 YKL165C-AYKL165C-A 234 nt2.27□□□□□ -2.05
NIT3P49954 YOR376WYOR376W 369 nt2.27□□□□□ -2.05
NIT3P49954 YBR182C-AYBR182C-A 195 nt2.27□□□□□ -2.05
NIT3P49954 RAD34YDR314C 2079 nt2.27□□□□□ -2.05
NIT3P49954 UBP1YDL122W 2430 nt2.27□□□□□ -2.05
NIT3P49954 SLN1YIL147C 3663 nt2.27□□□□□ -2.05
NIT3P49954 ZIP1YDR285W 2628 nt2.26□□□□□ -2.05
NIT3P49954 MSC6YOR354C 2079 nt2.26□□□□□ -2.05
NIT3P49954 CHC1YGL206C 4962 nt2.26□□□□□ -2.05
NIT3P49954 YDR182W-AYDR182W-A 204 nt2.26□□□□□ -2.05
NIT3P49954 RPL37BYDR500C 267 nt2.26□□□□□ -2.05
NIT3P49954 BRP1YGL007W 378 nt2.26□□□□□ -2.05
NIT3P49954 YHR180W-AYHR180W-A 183 nt2.26□□□□□ -2.05
NIT3P49954 tW(CCA)G1tW(CCA)G1 72 nt2.26□□□□□ -2.05
NIT3P49954 RPL34BYIL052C 366 nt2.26□□□□□ -2.05
NIT3P49954 tW(CCA)G2tW(CCA)G2 72 nt2.26□□□□□ -2.05
NIT3P49954 tW(CCA)JtW(CCA)J 72 nt2.26□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms