Protein–RNA interactions for Protein: P48995

TRPC1, Short transient receptor potential channel 1, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1P48995 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRPC1P48995 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRPC1P48995 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRPC1P48995 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
TRPC1P48995 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRPC1P48995 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRPC1P48995 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRPC1P48995 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRPC1P48995 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRPC1P48995 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.36■□□□□ 0.69
TRPC1P48995 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.36■□□□□ 0.69
TRPC1P48995 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.36■□□□□ 0.69
TRPC1P48995 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.36■□□□□ 0.69
TRPC1P48995 AC010141.2-201ENST00000452426 721 ntBASIC19.36■□□□□ 0.69
TRPC1P48995 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.36■□□□□ 0.69
TRPC1P48995 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRPC1P48995 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.36■□□□□ 0.69
TRPC1P48995 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TRPC1P48995 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRPC1P48995 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TRPC1P48995 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRPC1P48995 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
TRPC1P48995 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.36■□□□□ 0.69
TRPC1P48995 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.36■□□□□ 0.69
TRPC1P48995 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRPC1P48995 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRPC1P48995 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TRPC1P48995 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRPC1P48995 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRPC1P48995 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRPC1P48995 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.35■□□□□ 0.69
TRPC1P48995 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRPC1P48995 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRPC1P48995 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRPC1P48995 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRPC1P48995 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.35■□□□□ 0.69
TRPC1P48995 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.35■□□□□ 0.69
TRPC1P48995 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TRPC1P48995 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRPC1P48995 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRPC1P48995 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRPC1P48995 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRPC1P48995 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.35■□□□□ 0.69
TRPC1P48995 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRPC1P48995 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRPC1P48995 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.34■□□□□ 0.69
TRPC1P48995 AC116050.2-201ENST00000612102 1779 ntBASIC19.34■□□□□ 0.69
TRPC1P48995 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRPC1P48995 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.34■□□□□ 0.69
TRPC1P48995 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRPC1P48995 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRPC1P48995 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.34■□□□□ 0.69
TRPC1P48995 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRPC1P48995 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRPC1P48995 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRPC1P48995 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.34■□□□□ 0.69
TRPC1P48995 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.34■□□□□ 0.69
TRPC1P48995 MIR2861-201ENST00000636310 90 ntBASIC19.34■□□□□ 0.69
TRPC1P48995 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRPC1P48995 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRPC1P48995 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
TRPC1P48995 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TRPC1P48995 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.33■□□□□ 0.69
TRPC1P48995 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.33■□□□□ 0.69
TRPC1P48995 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRPC1P48995 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.69
TRPC1P48995 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
TRPC1P48995 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRPC1P48995 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.33■□□□□ 0.69
TRPC1P48995 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRPC1P48995 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
TRPC1P48995 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRPC1P48995 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRPC1P48995 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.33■□□□□ 0.68
TRPC1P48995 AC006015.1-201ENST00000429970 570 ntBASIC19.33■□□□□ 0.68
TRPC1P48995 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRPC1P48995 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRPC1P48995 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRPC1P48995 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRPC1P48995 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
TRPC1P48995 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.33■□□□□ 0.68
TRPC1P48995 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRPC1P48995 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.32■□□□□ 0.68
TRPC1P48995 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.32■□□□□ 0.68
TRPC1P48995 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRPC1P48995 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.32■□□□□ 0.68
TRPC1P48995 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRPC1P48995 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRPC1P48995 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRPC1P48995 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRPC1P48995 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
TRPC1P48995 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.32■□□□□ 0.68
TRPC1P48995 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.32■□□□□ 0.68
TRPC1P48995 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.32■□□□□ 0.68
TRPC1P48995 AC080038.1-201ENST00000611274 1154 ntBASIC19.32■□□□□ 0.68
TRPC1P48995 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRPC1P48995 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRPC1P48995 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRPC1P48995 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
TRPC1P48995 AFG3L1P-217ENST00000557444 2447 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms