Protein–RNA interactions for Protein: P43593

UBP6, Ubiquitin carboxyl-terminal hydrolase 6, yeastyeast

Known RBP Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP6P43593 tW(CCA)JtW(CCA)J 72 nt2.46□□□□□ -2.02
UBP6P43593 tW(CCA)KtW(CCA)K 72 nt2.46□□□□□ -2.02
UBP6P43593 tW(CCA)MtW(CCA)M 72 nt2.46□□□□□ -2.02
UBP6P43593 tW(CCA)PtW(CCA)P 72 nt2.46□□□□□ -2.02
UBP6P43593 YJL135WYJL135W 318 nt2.46□□□□□ -2.02
UBP6P43593 MDM20YOL076W 2391 nt2.46□□□□□ -2.02
UBP6P43593 VIK1YPL253C 1944 nt2.46□□□□□ -2.02
UBP6P43593 TFC8YPL007C 1767 nt2.46□□□□□ -2.02
UBP6P43593 DNF1YER166W 4716 nt2.45□□□□□ -2.02
UBP6P43593 SSS1YDR086C 243 nt2.45□□□□□ -2.02
UBP6P43593 YJL197C-AYJL197C-A 282 nt2.45□□□□□ -2.02
UBP6P43593 YMR230W-AYMR230W-A 189 nt2.45□□□□□ -2.02
UBP6P43593 PSD2YGR170W 3417 nt2.44□□□□□ -2.02
UBP6P43593 YHR032W-AYHR032W-A 180 nt2.44□□□□□ -2.02
UBP6P43593 YMR307C-AYMR307C-A 195 nt2.44□□□□□ -2.02
UBP6P43593 YCL046WYCL046W 324 nt2.44□□□□□ -2.02
UBP6P43593 SPT21YMR179W 2277 nt2.44□□□□□ -2.02
UBP6P43593 YDR239CYDR239C 2364 nt2.44□□□□□ -2.02
UBP6P43593 TRL1YJL087C 2484 nt2.44□□□□□ -2.02
UBP6P43593 snR72snR72 98 nt2.43□□□□□ -2.02
UBP6P43593 YGL052WYGL052W 306 nt2.43□□□□□ -2.02
UBP6P43593 YHR071C-AYHR071C-A 321 nt2.43□□□□□ -2.02
UBP6P43593 APQ12YIL040W 417 nt2.43□□□□□ -2.02
UBP6P43593 GIP3YPL137C 3831 nt2.43□□□□□ -2.02
UBP6P43593 RAV1YJR033C 4074 nt2.43□□□□□ -2.02
UBP6P43593 SGM1YJR134C 2124 nt2.42□□□□□ -2.02
UBP6P43593 FKS3YMR306W 5358 nt2.42□□□□□ -2.02
UBP6P43593 GPG1YGL121C 381 nt2.42□□□□□ -2.02
UBP6P43593 YLR120W-AYLR120W-A 102 nt2.42□□□□□ -2.02
UBP6P43593 ZRG17YNR039C 1818 nt2.42□□□□□ -2.02
UBP6P43593 CDC60YPL160W 3273 nt2.41□□□□□ -2.02
UBP6P43593 YIL156W-BYIL156W-B 222 nt2.41□□□□□ -2.02
UBP6P43593 IES4YOR189W 351 nt2.41□□□□□ -2.02
UBP6P43593 ACM1YPL267W 630 nt2.41□□□□□ -2.02
UBP6P43593 TCB2YNL087W 3537 nt2.41□□□□□ -2.02
UBP6P43593 YDR341CYDR341C 1824 nt2.4□□□□□ -2.02
UBP6P43593 YLL032CYLL032C 2478 nt2.4□□□□□ -2.03
UBP6P43593 TIM9YEL020W-A 264 nt2.4□□□□□ -2.03
UBP6P43593 PAU2YEL049W 363 nt2.4□□□□□ -2.03
UBP6P43593 YCK3YER123W 1575 nt2.4□□□□□ -2.03
UBP6P43593 DCP2YNL118C 2913 nt2.39□□□□□ -2.03
UBP6P43593 YRB1YDR002W 606 nt2.39□□□□□ -2.03
UBP6P43593 YDR003W-AYDR003W-A 123 nt2.39□□□□□ -2.03
UBP6P43593 BRP1YGL007W 378 nt2.39□□□□□ -2.03
UBP6P43593 INA22YIR024C 651 nt2.39□□□□□ -2.03
UBP6P43593 YMR321CYMR321C 318 nt2.39□□□□□ -2.03
UBP6P43593 NPR2YEL062W 1848 nt2.39□□□□□ -2.03
UBP6P43593 SIR3YLR442C 2937 nt2.38□□□□□ -2.03
UBP6P43593 ZIP1YDR285W 2628 nt2.38□□□□□ -2.03
UBP6P43593 YGL007C-AYGL007C-A 87 nt2.38□□□□□ -2.03
UBP6P43593 RTT107YHR154W 3213 nt2.38□□□□□ -2.03
UBP6P43593 YOR015WYOR015W 360 nt2.38□□□□□ -2.03
UBP6P43593 PDE2YOR360C 1581 nt2.38□□□□□ -2.03
UBP6P43593 IRC8YJL051W 2469 nt2.37□□□□□ -2.03
UBP6P43593 YEF3YLR249W 3135 nt2.37□□□□□ -2.03
UBP6P43593 PDR11YIL013C 4236 nt2.37□□□□□ -2.03
UBP6P43593 NOP14YDL148C 2433 nt2.37□□□□□ -2.03
UBP6P43593 Q0032Q0032 291 nt2.37□□□□□ -2.03
UBP6P43593 YCL023CYCL023C 348 nt2.37□□□□□ -2.03
UBP6P43593 PHO91YNR013C 2685 nt2.37□□□□□ -2.03
UBP6P43593 TOR1YJR066W 7413 nt2.37□□□□□ -2.03
UBP6P43593 SYH1YPL105C 2550 nt2.37□□□□□ -2.03
UBP6P43593 DNA2YHR164C 4569 nt2.36□□□□□ -2.03
UBP6P43593 NAM7YMR080C 2916 nt2.36□□□□□ -2.03
UBP6P43593 NIP100YPL174C 2607 nt2.36□□□□□ -2.03
UBP6P43593 tF(GAA)QtF(GAA)Q 75 nt2.36□□□□□ -2.03
UBP6P43593 PAM16YJL104W 450 nt2.36□□□□□ -2.03
UBP6P43593 PFD1YJL179W 330 nt2.36□□□□□ -2.03
UBP6P43593 YKR075W-AYKR075W-A 270 nt2.36□□□□□ -2.03
UBP6P43593 PET309YLR067C 2898 nt2.36□□□□□ -2.03
UBP6P43593 VPS13YLL040C 9435 nt2.36□□□□□ -2.03
UBP6P43593 MAK10YEL053C 2202 nt2.36□□□□□ -2.03
UBP6P43593 NEW1YPL226W 3591 nt2.35□□□□□ -2.03
UBP6P43593 MSB1YOR188W 3414 nt2.35□□□□□ -2.03
UBP6P43593 YER088C-AYER088C-A 324 nt2.35□□□□□ -2.03
UBP6P43593 YOL160WYOL160W 342 nt2.35□□□□□ -2.03
UBP6P43593 RTT101YJL047C 2529 nt2.35□□□□□ -2.03
UBP6P43593 MPT5YGL178W 2580 nt2.35□□□□□ -2.03
UBP6P43593 SGS1YMR190C 4344 nt2.34□□□□□ -2.03
UBP6P43593 VPS54YDR027C 2670 nt2.34□□□□□ -2.03
UBP6P43593 SRP14YDL092W 441 nt2.34□□□□□ -2.03
UBP6P43593 RPL37BYDR500C 267 nt2.34□□□□□ -2.03
UBP6P43593 YBL012CYBL012C 402 nt2.34□□□□□ -2.03
UBP6P43593 YOL098CYOL098C 3114 nt2.33□□□□□ -2.04
UBP6P43593 UBP1YDL122W 2430 nt2.33□□□□□ -2.04
UBP6P43593 SAS3YBL052C 2496 nt2.33□□□□□ -2.04
UBP6P43593 IRA2YOL081W 9240 nt2.33□□□□□ -2.04
UBP6P43593 YPR097WYPR097W 3222 nt2.32□□□□□ -2.04
UBP6P43593 SPC98YNL126W 2541 nt2.32□□□□□ -2.04
UBP6P43593 PHO2YDL106C 1680 nt2.32□□□□□ -2.04
UBP6P43593 YNL198CYNL198C 303 nt2.32□□□□□ -2.04
UBP6P43593 YOR302WYOR302W 78 nt2.32□□□□□ -2.04
UBP6P43593 CHC1YGL206C 4962 nt2.32□□□□□ -2.04
UBP6P43593 PDR3YBL005W 2931 nt2.32□□□□□ -2.04
UBP6P43593 SAP185YJL098W 3177 nt2.31□□□□□ -2.04
UBP6P43593 MRP10YDL045W-A 288 nt2.31□□□□□ -2.04
UBP6P43593 SCD5YOR329C 2619 nt2.3□□□□□ -2.04
UBP6P43593 ISD11YER048W-A 285 nt2.3□□□□□ -2.04
UBP6P43593 YMR242W-AYMR242W-A 90 nt2.3□□□□□ -2.04
UBP6P43593 YOR108C-AYOR108C-A 210 nt2.3□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 25.5 ms