Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.4■□□□□ 0.86
HADHAP40939 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.4■□□□□ 0.86
HADHAP40939 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HADHAP40939 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HADHAP40939 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.39■□□□□ 0.86
HADHAP40939 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HADHAP40939 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HADHAP40939 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.39■□□□□ 0.86
HADHAP40939 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HADHAP40939 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.39■□□□□ 0.85
HADHAP40939 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
HADHAP40939 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HADHAP40939 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
HADHAP40939 AC087633.2-202ENST00000565166 1439 ntBASIC20.39■□□□□ 0.85
HADHAP40939 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.39■□□□□ 0.85
HADHAP40939 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
HADHAP40939 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HADHAP40939 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HADHAP40939 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HADHAP40939 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.39■□□□□ 0.85
HADHAP40939 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HADHAP40939 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.39■□□□□ 0.85
HADHAP40939 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
HADHAP40939 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HADHAP40939 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HADHAP40939 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.39■□□□□ 0.85
HADHAP40939 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HADHAP40939 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HADHAP40939 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HADHAP40939 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HADHAP40939 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HADHAP40939 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.38■□□□□ 0.85
HADHAP40939 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HADHAP40939 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HADHAP40939 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
HADHAP40939 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
HADHAP40939 MCRIP2P1-201ENST00000394346 511 ntBASIC20.38■□□□□ 0.85
HADHAP40939 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
HADHAP40939 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HADHAP40939 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.38■□□□□ 0.85
HADHAP40939 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.38■□□□□ 0.85
HADHAP40939 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HADHAP40939 AL121603.2-201ENST00000557373 2117 ntBASIC20.38■□□□□ 0.85
HADHAP40939 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
HADHAP40939 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
HADHAP40939 KRT8P36-201ENST00000489121 1440 ntBASIC20.37■□□□□ 0.85
HADHAP40939 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HADHAP40939 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.37■□□□□ 0.85
HADHAP40939 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.37■□□□□ 0.85
HADHAP40939 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.37■□□□□ 0.85
HADHAP40939 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HADHAP40939 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.37■□□□□ 0.85
HADHAP40939 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HADHAP40939 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HADHAP40939 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.37■□□□□ 0.85
HADHAP40939 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
HADHAP40939 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.37■□□□□ 0.85
HADHAP40939 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.37■□□□□ 0.85
HADHAP40939 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HADHAP40939 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HADHAP40939 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HADHAP40939 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
HADHAP40939 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HADHAP40939 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HADHAP40939 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
HADHAP40939 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HADHAP40939 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HADHAP40939 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HADHAP40939 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.36■□□□□ 0.85
HADHAP40939 AC099778.1-201ENST00000568593 1911 ntBASIC20.36■□□□□ 0.85
HADHAP40939 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.36■□□□□ 0.85
HADHAP40939 AL512625.2-201ENST00000417533 625 ntBASIC20.36■□□□□ 0.85
HADHAP40939 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
HADHAP40939 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.36■□□□□ 0.85
HADHAP40939 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HADHAP40939 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HADHAP40939 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
HADHAP40939 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HADHAP40939 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HADHAP40939 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HADHAP40939 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HADHAP40939 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HADHAP40939 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HADHAP40939 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HADHAP40939 AC133552.2-202ENST00000575694 574 ntBASIC20.35■□□□□ 0.85
HADHAP40939 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.35■□□□□ 0.85
HADHAP40939 RAP2CP1-201ENST00000605103 478 ntBASIC20.35■□□□□ 0.85
HADHAP40939 AL356652.1-201ENST00000615962 565 ntBASIC20.35■□□□□ 0.85
HADHAP40939 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
HADHAP40939 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HADHAP40939 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HADHAP40939 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
HADHAP40939 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HADHAP40939 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.34■□□□□ 0.85
HADHAP40939 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HADHAP40939 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HADHAP40939 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HADHAP40939 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HADHAP40939 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HADHAP40939 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms