Protein–RNA interactions for Protein: P39538

UBP12, Ubiquitin carboxyl-terminal hydrolase 12, yeastyeast

Predictions only

Length 1,254 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP12P39538 tW(UCA)QtW(UCA)Q 74 nt2.27□□□□□ -2.05
UBP12P39538 YBL012CYBL012C 402 nt2.27□□□□□ -2.05
UBP12P39538 YOP1YPR028W 543 nt2.27□□□□□ -2.05
UBP12P39538 YOR343W-BYOR343W-B 5313 nt2.27□□□□□ -2.05
UBP12P39538 MCD1YDL003W 1701 nt2.27□□□□□ -2.05
UBP12P39538 RFX1YLR176C 2436 nt2.27□□□□□ -2.05
UBP12P39538 LYS14YDR034C 2373 nt2.27□□□□□ -2.05
UBP12P39538 RKM1YPL208W 1752 nt2.26□□□□□ -2.05
UBP12P39538 MSC6YOR354C 2079 nt2.26□□□□□ -2.05
UBP12P39538 ABM1YJR108W 372 nt2.26□□□□□ -2.05
UBP12P39538 RLM1YPL089C 2031 nt2.25□□□□□ -2.05
UBP12P39538 YBP1YBR216C 2025 nt2.25□□□□□ -2.05
UBP12P39538 RIM20YOR275C 1986 nt2.25□□□□□ -2.05
UBP12P39538 YMR272W-BYMR272W-B 108 nt2.25□□□□□ -2.05
UBP12P39538 YAF9YNL107W 681 nt2.25□□□□□ -2.05
UBP12P39538 NUT2YPR168W 474 nt2.25□□□□□ -2.05
UBP12P39538 CFT2YLR115W 2580 nt2.25□□□□□ -2.05
UBP12P39538 NOP14YDL148C 2433 nt2.25□□□□□ -2.05
UBP12P39538 USO1YDL058W 5373 nt2.24□□□□□ -2.05
UBP12P39538 FKS1YLR342W 5631 nt2.24□□□□□ -2.05
UBP12P39538 CYC7YEL039C 342 nt2.24□□□□□ -2.05
UBP12P39538 RPL38YLR325C 237 nt2.24□□□□□ -2.05
UBP12P39538 TIM18YOR297C 579 nt2.24□□□□□ -2.05
UBP12P39538 SAR1YPL218W 573 nt2.24□□□□□ -2.05
UBP12P39538 PAU3YCR104W 375 nt2.23□□□□□ -2.05
UBP12P39538 TMA7YLR262C-A 195 nt2.23□□□□□ -2.05
UBP12P39538 YKL118WYKL118W 312 nt2.22□□□□□ -2.05
UBP12P39538 MRPL31YKL138C 396 nt2.22□□□□□ -2.05
UBP12P39538 UPS1YLR193C 528 nt2.22□□□□□ -2.05
UBP12P39538 YSY6YBR162W-A 198 nt2.22□□□□□ -2.05
UBP12P39538 MSH5YDL154W 2706 nt2.22□□□□□ -2.05
UBP12P39538 AGC1YPR021C 2709 nt2.22□□□□□ -2.05
UBP12P39538 YHR071C-AYHR071C-A 321 nt2.21□□□□□ -2.06
UBP12P39538 TOR2YKL203C 7425 nt2.21□□□□□ -2.06
UBP12P39538 MSH6YDR097C 3729 nt2.2□□□□□ -2.06
UBP12P39538 YDR003W-AYDR003W-A 123 nt2.2□□□□□ -2.06
UBP12P39538 ANS1YHR126C 480 nt2.2□□□□□ -2.06
UBP12P39538 YML007C-AYML007C-A 111 nt2.2□□□□□ -2.06
UBP12P39538 YDR102CYDR102C 333 nt2.19□□□□□ -2.06
UBP12P39538 PCC1YKR095W-A 267 nt2.19□□□□□ -2.06
UBP12P39538 RPB10YOR210W 213 nt2.19□□□□□ -2.06
UBP12P39538 MLH3YPL164C 2148 nt2.19□□□□□ -2.06
UBP12P39538 YJR039WYJR039W 3366 nt2.19□□□□□ -2.06
UBP12P39538 MDM20YOL076W 2391 nt2.18□□□□□ -2.06
UBP12P39538 YPL225WYPL225W 441 nt2.18□□□□□ -2.06
UBP12P39538 snR51snR51 107 nt2.18□□□□□ -2.06
UBP12P39538 HIR3YJR140C 4947 nt2.17□□□□□ -2.06
UBP12P39538 YLL032CYLL032C 2478 nt2.17□□□□□ -2.06
UBP12P39538 SAS3YBL052C 2496 nt2.17□□□□□ -2.06
UBP12P39538 HSH155YMR288W 2916 nt2.17□□□□□ -2.06
UBP12P39538 TRX1YLR043C 312 nt2.17□□□□□ -2.06
UBP12P39538 YDR169C-AYDR169C-A 150 nt2.16□□□□□ -2.06
UBP12P39538 CSN9YDR179C 489 nt2.16□□□□□ -2.06
UBP12P39538 YHR007C-AYHR007C-A 216 nt2.16□□□□□ -2.06
UBP12P39538 HTB2YBL002W 396 nt2.16□□□□□ -2.06
UBP12P39538 DGR2YKL121W 2559 nt2.15□□□□□ -2.06
UBP12P39538 RPL35AYDL191W 363 nt2.15□□□□□ -2.07
UBP12P39538 YHL037CYHL037C 402 nt2.15□□□□□ -2.07
UBP12P39538 INP2YMR163C 2118 nt2.15□□□□□ -2.07
UBP12P39538 HSL1YKL101W 4557 nt2.14□□□□□ -2.07
UBP12P39538 TAR1YLR154W-C 375 nt2.14□□□□□ -2.07
UBP12P39538 YNL146WYNL146W 303 nt2.14□□□□□ -2.07
UBP12P39538 snR36snR36 182 nt2.14□□□□□ -2.07
UBP12P39538 UTP21YLR409C 2820 nt2.14□□□□□ -2.07
UBP12P39538 LHS1YKL073W 2646 nt2.13□□□□□ -2.07
UBP12P39538 YDR426CYDR426C 378 nt2.13□□□□□ -2.07
UBP12P39538 YMR141W-AYMR141W-A 225 nt2.13□□□□□ -2.07
UBP12P39538 YPR002C-AYPR002C-A 198 nt2.13□□□□□ -2.07
UBP12P39538 SFB2YNL049C 2631 nt2.12□□□□□ -2.07
UBP12P39538 YDR413CYDR413C 576 nt2.12□□□□□ -2.07
UBP12P39538 RPL39YJL189W 156 nt2.11□□□□□ -2.07
UBP12P39538 CFT1YDR301W 4074 nt2.11□□□□□ -2.07
UBP12P39538 NPC2YDL046W 522 nt2.1□□□□□ -2.07
UBP12P39538 NHP2YDL208W 471 nt2.1□□□□□ -2.07
UBP12P39538 YDR183C-AYDR183C-A 258 nt2.1□□□□□ -2.07
UBP12P39538 YOR108C-AYOR108C-A 210 nt2.1□□□□□ -2.07
UBP12P39538 SRP14YDL092W 441 nt2.09□□□□□ -2.07
UBP12P39538 MAM33YIL070C 801 nt2.09□□□□□ -2.07
UBP12P39538 TRM3YDL112W 4311 nt2.09□□□□□ -2.08
UBP12P39538 IRC20YLR247C 4671 nt2.09□□□□□ -2.08
UBP12P39538 YFL032WYFL032W 321 nt2.08□□□□□ -2.08
UBP12P39538 PIG1YLR273C 1947 nt2.08□□□□□ -2.08
UBP12P39538 YER097WYER097W 330 nt2.07□□□□□ -2.08
UBP12P39538 BRR2YER172C 6492 nt2.07□□□□□ -2.08
UBP12P39538 YHR214C-BYHR214C-B 5382 nt2.06□□□□□ -2.08
UBP12P39538 YNL144CYNL144C 2223 nt2.06□□□□□ -2.08
UBP12P39538 YDR048CYDR048C 315 nt2.06□□□□□ -2.08
UBP12P39538 SDH2YLL041C 801 nt2.06□□□□□ -2.08
UBP12P39538 YOR199WYOR199W 330 nt2.06□□□□□ -2.08
UBP12P39538 ZIP2YGL249W 2115 nt2.06□□□□□ -2.08
UBP12P39538 APL2YKL135C 2181 nt2.06□□□□□ -2.08
UBP12P39538 RTP1YMR185W 2946 nt2.05□□□□□ -2.08
UBP12P39538 NUP192YJL039C 5052 nt2.05□□□□□ -2.08
UBP12P39538 snR72snR72 98 nt2.05□□□□□ -2.08
UBP12P39538 YMR031W-AYMR031W-A 327 nt2.05□□□□□ -2.08
UBP12P39538 YMR242W-AYMR242W-A 90 nt2.05□□□□□ -2.08
UBP12P39538 ENV11YGR071C 2583 nt2.04□□□□□ -2.08
UBP12P39538 PAU2YEL049W 363 nt2.04□□□□□ -2.08
UBP12P39538 UBR2YLR024C 5619 nt2.04□□□□□ -2.08
UBP12P39538 YAR029WYAR029W 225 nt2.04□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 66.7 ms