Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC14.83□□□□□ -0.04
CKS2P33552 PRTG-204ENST00000561292 833 ntTSL 3 BASIC14.83□□□□□ -0.04
CKS2P33552 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
CKS2P33552 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CKS2P33552 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CKS2P33552 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CKS2P33552 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CKS2P33552 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.83□□□□□ -0.04
CKS2P33552 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.83□□□□□ -0.04
CKS2P33552 AC005332.7-201ENST00000614046 2005 ntBASIC14.83□□□□□ -0.04
CKS2P33552 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CKS2P33552 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.83□□□□□ -0.04
CKS2P33552 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CKS2P33552 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CKS2P33552 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CKS2P33552 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CKS2P33552 BX005040.4-201ENST00000637145 1518 ntBASIC14.82□□□□□ -0.04
CKS2P33552 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CKS2P33552 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CKS2P33552 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CKS2P33552 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CKS2P33552 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CKS2P33552 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CKS2P33552 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.82□□□□□ -0.04
CKS2P33552 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CKS2P33552 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CKS2P33552 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CKS2P33552 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CKS2P33552 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CKS2P33552 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CKS2P33552 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CKS2P33552 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.82□□□□□ -0.04
CKS2P33552 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CKS2P33552 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.82□□□□□ -0.04
CKS2P33552 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CKS2P33552 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CKS2P33552 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CKS2P33552 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CKS2P33552 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CKS2P33552 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CKS2P33552 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CKS2P33552 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CKS2P33552 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.81□□□□□ -0.04
CKS2P33552 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.81□□□□□ -0.04
CKS2P33552 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CKS2P33552 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CKS2P33552 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CKS2P33552 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.81□□□□□ -0.04
CKS2P33552 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
CKS2P33552 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC14.81□□□□□ -0.04
CKS2P33552 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CKS2P33552 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CKS2P33552 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CKS2P33552 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CKS2P33552 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CKS2P33552 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CKS2P33552 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CKS2P33552 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CKS2P33552 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CKS2P33552 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CKS2P33552 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CKS2P33552 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CKS2P33552 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CKS2P33552 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CKS2P33552 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CKS2P33552 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CKS2P33552 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CKS2P33552 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CKS2P33552 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CKS2P33552 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CKS2P33552 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.8□□□□□ -0.04
CKS2P33552 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CKS2P33552 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.8□□□□□ -0.04
CKS2P33552 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CKS2P33552 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CKS2P33552 AP005435.1-201ENST00000529293 1178 ntBASIC14.8□□□□□ -0.04
CKS2P33552 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.8□□□□□ -0.04
CKS2P33552 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CKS2P33552 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
CKS2P33552 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CKS2P33552 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CKS2P33552 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CKS2P33552 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
CKS2P33552 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CKS2P33552 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CKS2P33552 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CKS2P33552 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CKS2P33552 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKS2P33552 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.79□□□□□ -0.04
CKS2P33552 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKS2P33552 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CKS2P33552 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKS2P33552 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKS2P33552 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKS2P33552 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKS2P33552 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKS2P33552 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKS2P33552 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKS2P33552 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CKS2P33552 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms