Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 TFC8YPL007C 1767 nt2.18□□□□□ -2.06
CDC43P18898 MRD1YPR112C 2664 nt2.18□□□□□ -2.06
CDC43P18898 MNE1YOR350C 1992 nt2.18□□□□□ -2.06
CDC43P18898 YGL063C-AYGL063C-A 150 nt2.18□□□□□ -2.06
CDC43P18898 YHR071C-AYHR071C-A 321 nt2.18□□□□□ -2.06
CDC43P18898 SMY2YBR172C 2223 nt2.18□□□□□ -2.06
CDC43P18898 CDC53YDL132W 2448 nt2.18□□□□□ -2.06
CDC43P18898 YDR239CYDR239C 2364 nt2.17□□□□□ -2.06
CDC43P18898 APL5YPL195W 2799 nt2.17□□□□□ -2.06
CDC43P18898 SET2YJL168C 2202 nt2.17□□□□□ -2.06
CDC43P18898 YCR043CYCR043C 384 nt2.17□□□□□ -2.06
CDC43P18898 HYP2YEL034W 474 nt2.17□□□□□ -2.06
CDC43P18898 tK(UUU)DtK(UUU)D 73 nt2.17□□□□□ -2.06
CDC43P18898 tK(UUU)G1tK(UUU)G1 73 nt2.17□□□□□ -2.06
CDC43P18898 tK(UUU)G2tK(UUU)G2 73 nt2.17□□□□□ -2.06
CDC43P18898 tK(UUU)KtK(UUU)K 73 nt2.17□□□□□ -2.06
CDC43P18898 tK(UUU)LtK(UUU)L 73 nt2.17□□□□□ -2.06
CDC43P18898 tK(UUU)OtK(UUU)O 73 nt2.17□□□□□ -2.06
CDC43P18898 tK(UUU)PtK(UUU)P 73 nt2.17□□□□□ -2.06
CDC43P18898 YLR012CYLR012C 300 nt2.17□□□□□ -2.06
CDC43P18898 YBL012CYBL012C 402 nt2.17□□□□□ -2.06
CDC43P18898 COS111YBR203W 2775 nt2.17□□□□□ -2.06
CDC43P18898 UTP14YML093W 2700 nt2.17□□□□□ -2.06
CDC43P18898 MET6YER091C 2304 nt2.17□□□□□ -2.06
CDC43P18898 SWI5YDR146C 2130 nt2.17□□□□□ -2.06
CDC43P18898 CRM1YGR218W 3255 nt2.16□□□□□ -2.06
CDC43P18898 GEA1YJR031C 4227 nt2.16□□□□□ -2.06
CDC43P18898 HSL1YKL101W 4557 nt2.16□□□□□ -2.06
CDC43P18898 HAL9YOL089C 3093 nt2.16□□□□□ -2.06
CDC43P18898 YGR050CYGR050C 357 nt2.16□□□□□ -2.06
CDC43P18898 YOR329W-AYOR329W-A 210 nt2.16□□□□□ -2.06
CDC43P18898 YCL046WYCL046W 324 nt2.16□□□□□ -2.06
CDC43P18898 MCM10YIL150C 1716 nt2.16□□□□□ -2.06
CDC43P18898 YLL007CYLL007C 1998 nt2.16□□□□□ -2.06
CDC43P18898 SWI6YLR182W 2412 nt2.16□□□□□ -2.06
CDC43P18898 ENV11YGR071C 2583 nt2.15□□□□□ -2.06
CDC43P18898 GCV2YMR189W 3105 nt2.15□□□□□ -2.07
CDC43P18898 PAU3YCR104W 375 nt2.15□□□□□ -2.07
CDC43P18898 SRP14YDL092W 441 nt2.15□□□□□ -2.07
CDC43P18898 YEL073CYEL073C 324 nt2.15□□□□□ -2.07
CDC43P18898 RPL6AYML073C 531 nt2.15□□□□□ -2.07
CDC43P18898 SNF5YBR289W 2718 nt2.15□□□□□ -2.07
CDC43P18898 UBP15YMR304W 3693 nt2.15□□□□□ -2.07
CDC43P18898 INP53YOR109W 3324 nt2.15□□□□□ -2.07
CDC43P18898 CAT2YML042W 2013 nt2.15□□□□□ -2.07
CDC43P18898 AKR1YDR264C 2295 nt2.15□□□□□ -2.07
CDC43P18898 IRA2YOL081W 9240 nt2.15□□□□□ -2.07
CDC43P18898 KAP123YER110C 3342 nt2.14□□□□□ -2.07
CDC43P18898 YDR003W-AYDR003W-A 123 nt2.14□□□□□ -2.07
CDC43P18898 YIR044CYIR044C 186 nt2.14□□□□□ -2.07
CDC43P18898 RPS25BYLR333C 327 nt2.14□□□□□ -2.07
CDC43P18898 YEF3YLR249W 3135 nt2.14□□□□□ -2.07
CDC43P18898 YBL005W-BYBL005W-B 5268 nt2.14□□□□□ -2.07
CDC43P18898 HSH155YMR288W 2916 nt2.14□□□□□ -2.07
CDC43P18898 MNL2YLR057W 2550 nt2.13□□□□□ -2.07
CDC43P18898 NAM7YMR080C 2916 nt2.13□□□□□ -2.07
CDC43P18898 SNU13YEL026W 381 nt2.13□□□□□ -2.07
CDC43P18898 YKL165C-AYKL165C-A 234 nt2.13□□□□□ -2.07
CDC43P18898 YLR154W-AYLR154W-A 186 nt2.13□□□□□ -2.07
CDC43P18898 CRS5YOR031W 210 nt2.13□□□□□ -2.07
CDC43P18898 YDL196WYDL196W 330 nt2.12□□□□□ -2.07
CDC43P18898 ATP7YKL016C 525 nt2.12□□□□□ -2.07
CDC43P18898 ACM1YPL267W 630 nt2.12□□□□□ -2.07
CDC43P18898 SLM1YIL105C 2061 nt2.11□□□□□ -2.07
CDC43P18898 SGM1YJR134C 2124 nt2.11□□□□□ -2.07
CDC43P18898 SSN2YDR443C 4263 nt2.11□□□□□ -2.07
CDC43P18898 PAU10YDR542W 363 nt2.11□□□□□ -2.07
CDC43P18898 PAU11YGL261C 363 nt2.11□□□□□ -2.07
CDC43P18898 tQ(UUG)BtQ(UUG)B 72 nt2.11□□□□□ -2.07
CDC43P18898 YHL005CYHL005C 393 nt2.11□□□□□ -2.07
CDC43P18898 YIL071W-AYIL071W-A 477 nt2.11□□□□□ -2.07
CDC43P18898 PAU4YLR461W 363 nt2.11□□□□□ -2.07
CDC43P18898 YMR122W-AYMR122W-A 255 nt2.11□□□□□ -2.07
CDC43P18898 YOL019W-AYOL019W-A 153 nt2.11□□□□□ -2.07
CDC43P18898 YOR072W-BYOR072W-B 162 nt2.11□□□□□ -2.07
CDC43P18898 MDM1YML104C 3384 nt2.11□□□□□ -2.07
CDC43P18898 ISW1YBR245C 3390 nt2.1□□□□□ -2.07
CDC43P18898 RRP6YOR001W 2202 nt2.1□□□□□ -2.07
CDC43P18898 SLY1YDR189W 2001 nt2.1□□□□□ -2.07
CDC43P18898 RGC1YPR115W 3252 nt2.1□□□□□ -2.07
CDC43P18898 RPL31AYDL075W 342 nt2.1□□□□□ -2.07
CDC43P18898 EMP24YGL200C 612 nt2.1□□□□□ -2.07
CDC43P18898 YIL174WYIL174W 228 nt2.1□□□□□ -2.07
CDC43P18898 YJL222W-AYJL222W-A 228 nt2.1□□□□□ -2.07
CDC43P18898 YLL019W-AYLL019W-A 93 nt2.1□□□□□ -2.07
CDC43P18898 NOC3YLR002C 1992 nt2.1□□□□□ -2.07
CDC43P18898 MSC6YOR354C 2079 nt2.1□□□□□ -2.07
CDC43P18898 SRO77YBL106C 3033 nt2.09□□□□□ -2.07
CDC43P18898 ZRG8YER033C 3231 nt2.09□□□□□ -2.07
CDC43P18898 RLM1YPL089C 2031 nt2.09□□□□□ -2.07
CDC43P18898 YOR073W-AYOR073W-A 234 nt2.09□□□□□ -2.07
CDC43P18898 ZRG17YNR039C 1818 nt2.09□□□□□ -2.08
CDC43P18898 SIR3YLR442C 2937 nt2.09□□□□□ -2.08
CDC43P18898 HOS4YIL112W 3252 nt2.09□□□□□ -2.08
CDC43P18898 UBR1YGR184C 5853 nt2.09□□□□□ -2.08
CDC43P18898 MLH1YMR167W 2310 nt2.08□□□□□ -2.08
CDC43P18898 RAD34YDR314C 2079 nt2.08□□□□□ -2.08
CDC43P18898 PSD2YGR170W 3417 nt2.08□□□□□ -2.08
CDC43P18898 YDR186CYDR186C 2634 nt2.07□□□□□ -2.08
CDC43P18898 BRP1YGL007W 378 nt2.07□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 49.5 ms