Protein–RNA interactions for Protein: P18564

ITGB6, Integrin beta-6, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6P18564 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
ITGB6P18564 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ITGB6P18564 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ITGB6P18564 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
ITGB6P18564 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITGB6P18564 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.07■□□□□ 0.8
ITGB6P18564 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.07■□□□□ 0.8
ITGB6P18564 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.07■□□□□ 0.8
ITGB6P18564 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITGB6P18564 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ITGB6P18564 AL391422.3-201ENST00000603791 2761 ntBASIC20.07■□□□□ 0.8
ITGB6P18564 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITGB6P18564 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITGB6P18564 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.07■□□□□ 0.8
ITGB6P18564 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITGB6P18564 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.07■□□□□ 0.8
ITGB6P18564 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.07■□□□□ 0.8
ITGB6P18564 AL356652.1-201ENST00000615962 565 ntBASIC20.07■□□□□ 0.8
ITGB6P18564 OR10C1-204ENST00000622521 1039 ntBASIC20.07■□□□□ 0.8
ITGB6P18564 AC073130.3-201ENST00000624389 2278 ntBASIC20.07■□□□□ 0.8
ITGB6P18564 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITGB6P18564 AC087633.2-202ENST00000565166 1439 ntBASIC20.07■□□□□ 0.8
ITGB6P18564 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITGB6P18564 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.07■□□□□ 0.8
ITGB6P18564 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.07■□□□□ 0.8
ITGB6P18564 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ITGB6P18564 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITGB6P18564 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITGB6P18564 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ITGB6P18564 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITGB6P18564 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITGB6P18564 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITGB6P18564 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ITGB6P18564 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.06■□□□□ 0.8
ITGB6P18564 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITGB6P18564 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.06■□□□□ 0.8
ITGB6P18564 LINC01521-201ENST00000504184 1943 ntBASIC20.06■□□□□ 0.8
ITGB6P18564 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITGB6P18564 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITGB6P18564 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITGB6P18564 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ITGB6P18564 MCRIP2P1-201ENST00000394346 511 ntBASIC20.06■□□□□ 0.8
ITGB6P18564 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.06■□□□□ 0.8
ITGB6P18564 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ITGB6P18564 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.06■□□□□ 0.8
ITGB6P18564 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.06■□□□□ 0.8
ITGB6P18564 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.06■□□□□ 0.8
ITGB6P18564 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.06■□□□□ 0.8
ITGB6P18564 AC010980.2-201ENST00000587099 1412 ntBASIC20.06■□□□□ 0.8
ITGB6P18564 GABARAPL3-202ENST00000624044 1851 ntBASIC20.06■□□□□ 0.8
ITGB6P18564 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITGB6P18564 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITGB6P18564 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
ITGB6P18564 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ITGB6P18564 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITGB6P18564 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITGB6P18564 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITGB6P18564 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITGB6P18564 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.05■□□□□ 0.8
ITGB6P18564 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITGB6P18564 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ITGB6P18564 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ITGB6P18564 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITGB6P18564 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.05■□□□□ 0.8
ITGB6P18564 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITGB6P18564 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ITGB6P18564 AF201337.1-201ENST00000520239 748 ntBASIC20.05■□□□□ 0.8
ITGB6P18564 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
ITGB6P18564 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ITGB6P18564 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITGB6P18564 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITGB6P18564 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITGB6P18564 PCDHAC2-203ENST00000615316 3011 ntBASIC20.05■□□□□ 0.8
ITGB6P18564 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ITGB6P18564 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITGB6P18564 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITGB6P18564 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ITGB6P18564 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.04■□□□□ 0.8
ITGB6P18564 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
ITGB6P18564 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.04■□□□□ 0.8
ITGB6P18564 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ITGB6P18564 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ITGB6P18564 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.04■□□□□ 0.8
ITGB6P18564 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
ITGB6P18564 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ITGB6P18564 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ITGB6P18564 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.04■□□□□ 0.8
ITGB6P18564 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ITGB6P18564 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.04■□□□□ 0.8
ITGB6P18564 AC098934.4-201ENST00000564127 592 ntBASIC20.04■□□□□ 0.8
ITGB6P18564 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
ITGB6P18564 CYP2T3P-201ENST00000601990 817 ntBASIC20.04■□□□□ 0.8
ITGB6P18564 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.04■□□□□ 0.8
ITGB6P18564 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ITGB6P18564 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ITGB6P18564 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ITGB6P18564 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ITGB6P18564 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ITGB6P18564 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ITGB6P18564 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms