Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXB3P14651 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXB3P14651 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXB3P14651 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXB3P14651 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXB3P14651 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXB3P14651 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXB3P14651 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXB3P14651 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXB3P14651 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXB3P14651 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXB3P14651 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXB3P14651 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXB3P14651 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.74■□□□□ 0.75
HOXB3P14651 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXB3P14651 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXB3P14651 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXB3P14651 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
HOXB3P14651 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXB3P14651 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HOXB3P14651 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXB3P14651 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
HOXB3P14651 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXB3P14651 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXB3P14651 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXB3P14651 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXB3P14651 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXB3P14651 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXB3P14651 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.73■□□□□ 0.75
HOXB3P14651 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXB3P14651 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXB3P14651 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXB3P14651 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXB3P14651 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.73■□□□□ 0.75
HOXB3P14651 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.73■□□□□ 0.75
HOXB3P14651 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXB3P14651 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXB3P14651 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXB3P14651 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXB3P14651 AC121338.2-201ENST00000622535 1744 ntBASIC19.73■□□□□ 0.75
HOXB3P14651 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXB3P14651 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXB3P14651 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXB3P14651 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXB3P14651 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXB3P14651 AC011484.1-201ENST00000377652 1995 ntBASIC19.72■□□□□ 0.75
HOXB3P14651 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXB3P14651 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXB3P14651 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
HOXB3P14651 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXB3P14651 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXB3P14651 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXB3P14651 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXB3P14651 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HOXB3P14651 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.72■□□□□ 0.75
HOXB3P14651 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.72■□□□□ 0.75
HOXB3P14651 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
HOXB3P14651 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.72■□□□□ 0.75
HOXB3P14651 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.72■□□□□ 0.75
HOXB3P14651 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HOXB3P14651 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HOXB3P14651 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXB3P14651 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.72■□□□□ 0.75
HOXB3P14651 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXB3P14651 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXB3P14651 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXB3P14651 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXB3P14651 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HOXB3P14651 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXB3P14651 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXB3P14651 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXB3P14651 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXB3P14651 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.71■□□□□ 0.75
HOXB3P14651 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXB3P14651 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXB3P14651 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXB3P14651 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXB3P14651 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXB3P14651 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXB3P14651 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXB3P14651 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXB3P14651 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXB3P14651 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXB3P14651 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXB3P14651 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
HOXB3P14651 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXB3P14651 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.71■□□□□ 0.75
HOXB3P14651 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXB3P14651 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXB3P14651 RN7SL602P-201ENST00000578326 324 ntBASIC19.71■□□□□ 0.75
HOXB3P14651 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXB3P14651 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.71■□□□□ 0.75
HOXB3P14651 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HOXB3P14651 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXB3P14651 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HOXB3P14651 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HOXB3P14651 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
HOXB3P14651 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HOXB3P14651 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.7■□□□□ 0.74
HOXB3P14651 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms