Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.64■□□□□ 0.74
CDH1P12830 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDH1P12830 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
CDH1P12830 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDH1P12830 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.64■□□□□ 0.74
CDH1P12830 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDH1P12830 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.64■□□□□ 0.74
CDH1P12830 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CDH1P12830 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH1P12830 AL355472.2-201ENST00000422958 438 ntBASIC19.64■□□□□ 0.73
CDH1P12830 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.64■□□□□ 0.73
CDH1P12830 AC105036.2-201ENST00000569468 176 ntBASIC19.64■□□□□ 0.73
CDH1P12830 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.64■□□□□ 0.73
CDH1P12830 AC100791.3-201ENST00000617619 330 ntBASIC19.64■□□□□ 0.73
CDH1P12830 AC010980.2-201ENST00000587099 1412 ntBASIC19.64■□□□□ 0.73
CDH1P12830 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH1P12830 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH1P12830 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.64■□□□□ 0.73
CDH1P12830 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.64■□□□□ 0.73
CDH1P12830 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH1P12830 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH1P12830 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH1P12830 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH1P12830 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.64■□□□□ 0.73
CDH1P12830 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH1P12830 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CDH1P12830 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH1P12830 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH1P12830 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CDH1P12830 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.63■□□□□ 0.73
CDH1P12830 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH1P12830 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH1P12830 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.63■□□□□ 0.73
CDH1P12830 KRT8P36-201ENST00000489121 1440 ntBASIC19.63■□□□□ 0.73
CDH1P12830 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH1P12830 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH1P12830 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH1P12830 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH1P12830 PGM5P4-201ENST00000421970 445 ntBASIC19.63■□□□□ 0.73
CDH1P12830 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.63■□□□□ 0.73
CDH1P12830 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.63■□□□□ 0.73
CDH1P12830 AF201337.1-201ENST00000520239 748 ntBASIC19.63■□□□□ 0.73
CDH1P12830 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH1P12830 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
CDH1P12830 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH1P12830 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
CDH1P12830 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CDH1P12830 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CDH1P12830 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH1P12830 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDH1P12830 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH1P12830 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH1P12830 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH1P12830 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CDH1P12830 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH1P12830 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH1P12830 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH1P12830 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH1P12830 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH1P12830 AC090192.1-201ENST00000517740 490 ntBASIC19.62■□□□□ 0.73
CDH1P12830 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH1P12830 AL356652.1-201ENST00000615962 565 ntBASIC19.62■□□□□ 0.73
CDH1P12830 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH1P12830 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
CDH1P12830 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH1P12830 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH1P12830 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH1P12830 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH1P12830 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH1P12830 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH1P12830 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDH1P12830 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH1P12830 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDH1P12830 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH1P12830 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDH1P12830 AFG3L1P-217ENST00000557444 2447 ntBASIC19.61■□□□□ 0.73
CDH1P12830 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH1P12830 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDH1P12830 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH1P12830 AL512625.2-201ENST00000417533 625 ntBASIC19.61■□□□□ 0.73
CDH1P12830 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH1P12830 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.61■□□□□ 0.73
CDH1P12830 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH1P12830 CYP2T3P-201ENST00000601990 817 ntBASIC19.61■□□□□ 0.73
CDH1P12830 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.61■□□□□ 0.73
CDH1P12830 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH1P12830 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDH1P12830 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH1P12830 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.61■□□□□ 0.73
CDH1P12830 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH1P12830 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.61■□□□□ 0.73
CDH1P12830 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CDH1P12830 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH1P12830 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH1P12830 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDH1P12830 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH1P12830 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH1P12830 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH1P12830 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH1P12830 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms