Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 AC133681.1-201ENST00000465482 601 ntBASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 AC006557.6-201ENST00000623071 864 ntBASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 AC027702.1-201ENST00000563810 1770 ntBASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB40ALP0C0E4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB40ALP0C0E4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
RAB40ALP0C0E4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB40ALP0C0E4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.02■□□□□ 0.64
RAB40ALP0C0E4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB40ALP0C0E4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB40ALP0C0E4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RAB40ALP0C0E4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB40ALP0C0E4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB40ALP0C0E4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RAB40ALP0C0E4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB40ALP0C0E4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
RAB40ALP0C0E4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RAB40ALP0C0E4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RAB40ALP0C0E4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB40ALP0C0E4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB40ALP0C0E4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB40ALP0C0E4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB40ALP0C0E4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB40ALP0C0E4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.01■□□□□ 0.63
RAB40ALP0C0E4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB40ALP0C0E4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB40ALP0C0E4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB40ALP0C0E4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.01■□□□□ 0.63
RAB40ALP0C0E4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.01■□□□□ 0.63
RAB40ALP0C0E4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
RAB40ALP0C0E4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RAB40ALP0C0E4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.01■□□□□ 0.63
RAB40ALP0C0E4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RAB40ALP0C0E4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB40ALP0C0E4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.01■□□□□ 0.63
RAB40ALP0C0E4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB40ALP0C0E4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB40ALP0C0E4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB40ALP0C0E4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB40ALP0C0E4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RAB40ALP0C0E4 KRT8P36-201ENST00000489121 1440 ntBASIC19■□□□□ 0.63
RAB40ALP0C0E4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19■□□□□ 0.63
RAB40ALP0C0E4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB40ALP0C0E4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RAB40ALP0C0E4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB40ALP0C0E4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RAB40ALP0C0E4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RAB40ALP0C0E4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
RAB40ALP0C0E4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RAB40ALP0C0E4 AC023632.3-201ENST00000521633 145 ntBASIC19■□□□□ 0.63
RAB40ALP0C0E4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19■□□□□ 0.63
RAB40ALP0C0E4 MIR4497-201ENST00000583208 89 ntBASIC19■□□□□ 0.63
RAB40ALP0C0E4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19■□□□□ 0.63
RAB40ALP0C0E4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19■□□□□ 0.63
RAB40ALP0C0E4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19■□□□□ 0.63
RAB40ALP0C0E4 Z99916.2-201ENST00000604037 246 ntBASIC19■□□□□ 0.63
RAB40ALP0C0E4 AC124016.1-201ENST00000609552 612 ntBASIC19■□□□□ 0.63
RAB40ALP0C0E4 MIR2861-201ENST00000636310 90 ntBASIC19■□□□□ 0.63
RAB40ALP0C0E4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB40ALP0C0E4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19■□□□□ 0.63
RAB40ALP0C0E4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RAB40ALP0C0E4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms