Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS1P07996 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
THBS1P07996 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS1P07996 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS1P07996 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.57■□□□□ 0.56
THBS1P07996 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
THBS1P07996 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.57■□□□□ 0.56
THBS1P07996 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.57■□□□□ 0.56
THBS1P07996 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.57■□□□□ 0.56
THBS1P07996 AC231657.2-201ENST00000624556 255 ntBASIC18.57■□□□□ 0.56
THBS1P07996 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.57■□□□□ 0.56
THBS1P07996 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS1P07996 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.57■□□□□ 0.56
THBS1P07996 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS1P07996 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS1P07996 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
THBS1P07996 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
THBS1P07996 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS1P07996 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS1P07996 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THBS1P07996 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
THBS1P07996 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
THBS1P07996 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.56■□□□□ 0.56
THBS1P07996 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
THBS1P07996 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THBS1P07996 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
THBS1P07996 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THBS1P07996 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THBS1P07996 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THBS1P07996 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.56■□□□□ 0.56
THBS1P07996 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THBS1P07996 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.56■□□□□ 0.56
THBS1P07996 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.56■□□□□ 0.56
THBS1P07996 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.56■□□□□ 0.56
THBS1P07996 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
THBS1P07996 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.56■□□□□ 0.56
THBS1P07996 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.56■□□□□ 0.56
THBS1P07996 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THBS1P07996 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.56■□□□□ 0.56
THBS1P07996 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THBS1P07996 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THBS1P07996 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS1P07996 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.55■□□□□ 0.56
THBS1P07996 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS1P07996 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS1P07996 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
THBS1P07996 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.55■□□□□ 0.56
THBS1P07996 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS1P07996 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS1P07996 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.55■□□□□ 0.56
THBS1P07996 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS1P07996 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.55■□□□□ 0.56
THBS1P07996 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
THBS1P07996 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS1P07996 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS1P07996 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS1P07996 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.55■□□□□ 0.56
THBS1P07996 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS1P07996 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.55■□□□□ 0.56
THBS1P07996 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
THBS1P07996 AC069236.1-201ENST00000604339 616 ntBASIC18.55■□□□□ 0.56
THBS1P07996 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.55■□□□□ 0.56
THBS1P07996 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS1P07996 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
THBS1P07996 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS1P07996 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
THBS1P07996 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
THBS1P07996 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
THBS1P07996 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.55■□□□□ 0.56
THBS1P07996 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
THBS1P07996 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.55■□□□□ 0.56
THBS1P07996 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS1P07996 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.55■□□□□ 0.56
THBS1P07996 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
THBS1P07996 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.54■□□□□ 0.56
THBS1P07996 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
THBS1P07996 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
THBS1P07996 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
THBS1P07996 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.54■□□□□ 0.56
THBS1P07996 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
THBS1P07996 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.54■□□□□ 0.56
THBS1P07996 CYP2T1P-201ENST00000432607 1285 ntBASIC18.54■□□□□ 0.56
THBS1P07996 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.54■□□□□ 0.56
THBS1P07996 AC080038.1-201ENST00000611274 1154 ntBASIC18.54■□□□□ 0.56
THBS1P07996 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.54■□□□□ 0.56
THBS1P07996 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.54■□□□□ 0.56
THBS1P07996 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.54■□□□□ 0.56
THBS1P07996 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
THBS1P07996 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
THBS1P07996 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.54■□□□□ 0.56
THBS1P07996 PCDHAC2-203ENST00000615316 3011 ntBASIC18.54■□□□□ 0.56
THBS1P07996 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
THBS1P07996 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
THBS1P07996 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.53■□□□□ 0.56
THBS1P07996 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
THBS1P07996 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
THBS1P07996 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
THBS1P07996 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
THBS1P07996 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.53■□□□□ 0.56
THBS1P07996 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms