Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.77■□□□□ 0.75
TNFP01375 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.77■□□□□ 0.75
TNFP01375 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
TNFP01375 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TNFP01375 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFP01375 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFP01375 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFP01375 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.76■□□□□ 0.75
TNFP01375 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFP01375 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFP01375 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TNFP01375 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFP01375 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.76■□□□□ 0.75
TNFP01375 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.76■□□□□ 0.75
TNFP01375 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFP01375 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.76■□□□□ 0.75
TNFP01375 AC239809.2-201ENST00000415381 517 ntBASIC19.76■□□□□ 0.75
TNFP01375 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFP01375 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.76■□□□□ 0.75
TNFP01375 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFP01375 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.76■□□□□ 0.75
TNFP01375 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.76■□□□□ 0.75
TNFP01375 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TNFP01375 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFP01375 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFP01375 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFP01375 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFP01375 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.75■□□□□ 0.75
TNFP01375 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFP01375 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.75■□□□□ 0.75
TNFP01375 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFP01375 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFP01375 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFP01375 HLA-G-202ENST00000376815 851 ntBASIC19.75■□□□□ 0.75
TNFP01375 HLA-G-203ENST00000376818 1127 ntBASIC19.75■□□□□ 0.75
TNFP01375 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.75■□□□□ 0.75
TNFP01375 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.75■□□□□ 0.75
TNFP01375 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFP01375 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.75■□□□□ 0.75
TNFP01375 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFP01375 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFP01375 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFP01375 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFP01375 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TNFP01375 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFP01375 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.75■□□□□ 0.75
TNFP01375 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFP01375 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFP01375 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.74■□□□□ 0.75
TNFP01375 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFP01375 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TNFP01375 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TNFP01375 AL596275.1-201ENST00000423464 877 ntBASIC19.74■□□□□ 0.75
TNFP01375 AC133681.1-201ENST00000465482 601 ntBASIC19.74■□□□□ 0.75
TNFP01375 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.74■□□□□ 0.75
TNFP01375 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
TNFP01375 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TNFP01375 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.74■□□□□ 0.75
TNFP01375 AC124016.1-201ENST00000609552 612 ntBASIC19.74■□□□□ 0.75
TNFP01375 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TNFP01375 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.74■□□□□ 0.75
TNFP01375 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFP01375 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFP01375 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TNFP01375 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFP01375 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFP01375 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFP01375 AC006128.1-201ENST00000624704 1661 ntBASIC19.73■□□□□ 0.75
TNFP01375 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TNFP01375 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.73■□□□□ 0.75
TNFP01375 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.73■□□□□ 0.75
TNFP01375 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
TNFP01375 KRASP1-201ENST00000407852 552 ntBASIC19.73■□□□□ 0.75
TNFP01375 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.73■□□□□ 0.75
TNFP01375 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.73■□□□□ 0.75
TNFP01375 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.73■□□□□ 0.75
TNFP01375 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.73■□□□□ 0.75
TNFP01375 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.73■□□□□ 0.75
TNFP01375 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.73■□□□□ 0.75
TNFP01375 AC110285.5-201ENST00000611501 352 ntBASIC19.73■□□□□ 0.75
TNFP01375 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TNFP01375 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFP01375 AC026310.3-201ENST00000625186 2373 ntBASIC19.73■□□□□ 0.75
TNFP01375 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.73■□□□□ 0.75
TNFP01375 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFP01375 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFP01375 FP700111.2-201ENST00000619190 1892 ntBASIC19.73■□□□□ 0.75
TNFP01375 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.73■□□□□ 0.75
TNFP01375 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TNFP01375 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.73■□□□□ 0.75
TNFP01375 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.72■□□□□ 0.75
TNFP01375 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFP01375 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.72■□□□□ 0.75
TNFP01375 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFP01375 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFP01375 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.72■□□□□ 0.75
TNFP01375 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TNFP01375 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TNFP01375 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFP01375 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms