Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.65□□□□□ -0.38
HERC2O95714 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
HERC2O95714 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HERC2O95714 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.65□□□□□ -0.39
HERC2O95714 TREX2-204ENST00000370212 861 ntTSL 5 BASIC12.64□□□□□ -0.39
HERC2O95714 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HERC2O95714 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HERC2O95714 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HERC2O95714 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HERC2O95714 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HERC2O95714 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC12.64□□□□□ -0.39
HERC2O95714 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
HERC2O95714 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.64□□□□□ -0.39
HERC2O95714 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
HERC2O95714 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HERC2O95714 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HERC2O95714 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HERC2O95714 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.64□□□□□ -0.39
HERC2O95714 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HERC2O95714 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HERC2O95714 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HERC2O95714 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HERC2O95714 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HERC2O95714 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HERC2O95714 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HERC2O95714 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
HERC2O95714 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HERC2O95714 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HERC2O95714 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HERC2O95714 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HERC2O95714 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC12.63□□□□□ -0.39
HERC2O95714 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.63□□□□□ -0.39
HERC2O95714 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.63□□□□□ -0.39
HERC2O95714 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HERC2O95714 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.63□□□□□ -0.39
HERC2O95714 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.63□□□□□ -0.39
HERC2O95714 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HERC2O95714 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC12.63□□□□□ -0.39
HERC2O95714 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HERC2O95714 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.63□□□□□ -0.39
HERC2O95714 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.63□□□□□ -0.39
HERC2O95714 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HERC2O95714 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC12.63□□□□□ -0.39
HERC2O95714 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HERC2O95714 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HERC2O95714 HIST1H2APS4-201ENST00000362070 348 ntBASIC12.63□□□□□ -0.39
HERC2O95714 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.63□□□□□ -0.39
HERC2O95714 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HERC2O95714 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC12.63□□□□□ -0.39
HERC2O95714 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HERC2O95714 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HERC2O95714 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HERC2O95714 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.63□□□□□ -0.39
HERC2O95714 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.63□□□□□ -0.39
HERC2O95714 AC010653.2-201ENST00000623505 997 ntBASIC12.63□□□□□ -0.39
HERC2O95714 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HERC2O95714 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HERC2O95714 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HERC2O95714 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
HERC2O95714 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HERC2O95714 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HERC2O95714 AC007322.3-201ENST00000426526 701 ntBASIC12.62□□□□□ -0.39
HERC2O95714 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC12.62□□□□□ -0.39
HERC2O95714 FAM8A3P-201ENST00000427218 844 ntBASIC12.62□□□□□ -0.39
HERC2O95714 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HERC2O95714 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC12.62□□□□□ -0.39
HERC2O95714 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HERC2O95714 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.62□□□□□ -0.39
HERC2O95714 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC12.62□□□□□ -0.39
HERC2O95714 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HERC2O95714 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC12.62□□□□□ -0.39
HERC2O95714 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HERC2O95714 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
HERC2O95714 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HERC2O95714 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HERC2O95714 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HERC2O95714 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HERC2O95714 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HERC2O95714 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HERC2O95714 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC12.62□□□□□ -0.39
HERC2O95714 AC007663.1-201ENST00000438948 1240 ntBASIC12.62□□□□□ -0.39
HERC2O95714 KSR1P1-201ENST00000446298 240 ntBASIC12.62□□□□□ -0.39
HERC2O95714 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.62□□□□□ -0.39
HERC2O95714 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.62□□□□□ -0.39
HERC2O95714 AC097488.1-201ENST00000507834 756 ntBASIC12.62□□□□□ -0.39
HERC2O95714 ZNF444P1-201ENST00000559497 298 ntBASIC12.62□□□□□ -0.39
HERC2O95714 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC12.61□□□□□ -0.39
HERC2O95714 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC12.61□□□□□ -0.39
HERC2O95714 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HERC2O95714 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
HERC2O95714 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.61□□□□□ -0.39
HERC2O95714 AC091304.2-201ENST00000564639 760 ntBASIC12.61□□□□□ -0.39
HERC2O95714 H19-210ENST00000439725 1929 ntTSL 2 BASIC12.61□□□□□ -0.39
HERC2O95714 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
HERC2O95714 AC116562.4-202ENST00000641738 218 ntBASIC12.61□□□□□ -0.39
HERC2O95714 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
HERC2O95714 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
HERC2O95714 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC12.61□□□□□ -0.39
HERC2O95714 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HERC2O95714 AKR1C7P-201ENST00000305623 895 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms