Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
RAPGEF3O95398 SAPCD2P2-201ENST00000431719 1174 ntBASIC30.56■■■□□ 2.48
RAPGEF3O95398 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC30.56■■■□□ 2.48
RAPGEF3O95398 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC30.56■■■□□ 2.48
RAPGEF3O95398 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
RAPGEF3O95398 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RAPGEF3O95398 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC30.56■■■□□ 2.48
RAPGEF3O95398 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
RAPGEF3O95398 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC30.55■■■□□ 2.48
RAPGEF3O95398 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
RAPGEF3O95398 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
RAPGEF3O95398 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC30.55■■■□□ 2.48
RAPGEF3O95398 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
RAPGEF3O95398 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
RAPGEF3O95398 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RAPGEF3O95398 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC30.54■■■□□ 2.48
RAPGEF3O95398 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
RAPGEF3O95398 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RAPGEF3O95398 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC30.54■■■□□ 2.48
RAPGEF3O95398 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
RAPGEF3O95398 AP005242.2-201ENST00000580065 1175 ntBASIC30.54■■■□□ 2.48
RAPGEF3O95398 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC30.54■■■□□ 2.48
RAPGEF3O95398 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC30.54■■■□□ 2.48
RAPGEF3O95398 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
RAPGEF3O95398 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
RAPGEF3O95398 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RAPGEF3O95398 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC30.53■■■□□ 2.48
RAPGEF3O95398 LINC01238-205ENST00000567549 1107 ntBASIC30.53■■■□□ 2.48
RAPGEF3O95398 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC30.53■■■□□ 2.48
RAPGEF3O95398 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
RAPGEF3O95398 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC30.52■■■□□ 2.48
RAPGEF3O95398 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RAPGEF3O95398 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC30.52■■■□□ 2.48
RAPGEF3O95398 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC30.52■■■□□ 2.48
RAPGEF3O95398 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC30.52■■■□□ 2.48
RAPGEF3O95398 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC30.52■■■□□ 2.48
RAPGEF3O95398 AP000550.4-202ENST00000639755 178 ntBASIC30.52■■■□□ 2.48
RAPGEF3O95398 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
RAPGEF3O95398 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
RAPGEF3O95398 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
RAPGEF3O95398 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
RAPGEF3O95398 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
RAPGEF3O95398 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
RAPGEF3O95398 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC30.52■■■□□ 2.48
RAPGEF3O95398 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC30.51■■■□□ 2.48
RAPGEF3O95398 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC30.51■■■□□ 2.47
RAPGEF3O95398 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
RAPGEF3O95398 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
RAPGEF3O95398 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
RAPGEF3O95398 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
RAPGEF3O95398 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
RAPGEF3O95398 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
RAPGEF3O95398 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC30.5■■■□□ 2.47
RAPGEF3O95398 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RAPGEF3O95398 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
RAPGEF3O95398 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RAPGEF3O95398 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RAPGEF3O95398 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC30.5■■■□□ 2.47
RAPGEF3O95398 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC30.5■■■□□ 2.47
RAPGEF3O95398 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC30.5■■■□□ 2.47
RAPGEF3O95398 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC30.5■■■□□ 2.47
RAPGEF3O95398 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
RAPGEF3O95398 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
RAPGEF3O95398 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC30.5■■■□□ 2.47
RAPGEF3O95398 AC139887.4-201ENST00000607877 719 ntBASIC30.5■■■□□ 2.47
RAPGEF3O95398 ABBA01031674.1-201ENST00000635145 728 ntBASIC30.5■■■□□ 2.47
RAPGEF3O95398 VPS72-207ENST00000640458 689 ntTSL 5 BASIC30.5■■■□□ 2.47
RAPGEF3O95398 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RAPGEF3O95398 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RAPGEF3O95398 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RAPGEF3O95398 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC30.49■■■□□ 2.47
RAPGEF3O95398 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC30.49■■■□□ 2.47
RAPGEF3O95398 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC30.49■■■□□ 2.47
RAPGEF3O95398 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
RAPGEF3O95398 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC30.49■■■□□ 2.47
RAPGEF3O95398 GRAMD4P8-201ENST00000605465 1115 ntBASIC30.49■■■□□ 2.47
RAPGEF3O95398 AL031985.4-201ENST00000642138 673 ntBASIC30.49■■■□□ 2.47
RAPGEF3O95398 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
RAPGEF3O95398 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RAPGEF3O95398 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
RAPGEF3O95398 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
RAPGEF3O95398 AL450487.1-201ENST00000426799 995 ntBASIC30.48■■■□□ 2.47
RAPGEF3O95398 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC30.48■■■□□ 2.47
RAPGEF3O95398 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC30.48■■■□□ 2.47
RAPGEF3O95398 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC30.48■■■□□ 2.47
RAPGEF3O95398 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC30.48■■■□□ 2.47
RAPGEF3O95398 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
RAPGEF3O95398 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC30.48■■■□□ 2.47
RAPGEF3O95398 FSCN1P1-201ENST00000568912 1481 ntBASIC30.48■■■□□ 2.47
RAPGEF3O95398 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC30.48■■■□□ 2.47
RAPGEF3O95398 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
RAPGEF3O95398 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
RAPGEF3O95398 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
RAPGEF3O95398 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
RAPGEF3O95398 IPPK-202ENST00000375522 882 ntTSL 3 BASIC30.47■■■□□ 2.47
RAPGEF3O95398 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
RAPGEF3O95398 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
RAPGEF3O95398 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
RAPGEF3O95398 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
RAPGEF3O95398 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC30.46■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms