Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBL3O95164 AC007322.3-201ENST00000426526 701 ntBASIC18.06■□□□□ 0.48
UBL3O95164 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.06■□□□□ 0.48
UBL3O95164 AL162412.1-201ENST00000567129 965 ntBASIC18.06■□□□□ 0.48
UBL3O95164 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBL3O95164 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.06■□□□□ 0.48
UBL3O95164 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.06■□□□□ 0.48
UBL3O95164 AC073111.5-205ENST00000641717 521 ntBASIC18.06■□□□□ 0.48
UBL3O95164 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBL3O95164 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBL3O95164 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL3O95164 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL3O95164 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.05■□□□□ 0.48
UBL3O95164 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL3O95164 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBL3O95164 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBL3O95164 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL3O95164 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL3O95164 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
UBL3O95164 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
UBL3O95164 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL3O95164 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL3O95164 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL3O95164 CNN2P6-201ENST00000439038 900 ntBASIC18.05■□□□□ 0.48
UBL3O95164 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.05■□□□□ 0.48
UBL3O95164 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.05■□□□□ 0.48
UBL3O95164 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBL3O95164 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.05■□□□□ 0.48
UBL3O95164 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
UBL3O95164 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL3O95164 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL3O95164 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL3O95164 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.05■□□□□ 0.48
UBL3O95164 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
UBL3O95164 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.05■□□□□ 0.48
UBL3O95164 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBL3O95164 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.04■□□□□ 0.48
UBL3O95164 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
UBL3O95164 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.04■□□□□ 0.48
UBL3O95164 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBL3O95164 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBL3O95164 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBL3O95164 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.04■□□□□ 0.48
UBL3O95164 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
UBL3O95164 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
UBL3O95164 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
UBL3O95164 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBL3O95164 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.04■□□□□ 0.48
UBL3O95164 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.04■□□□□ 0.48
UBL3O95164 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBL3O95164 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBL3O95164 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.04■□□□□ 0.48
UBL3O95164 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBL3O95164 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBL3O95164 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
UBL3O95164 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBL3O95164 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBL3O95164 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.04■□□□□ 0.48
UBL3O95164 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBL3O95164 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.03■□□□□ 0.48
UBL3O95164 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBL3O95164 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
UBL3O95164 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBL3O95164 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBL3O95164 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
UBL3O95164 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBL3O95164 AC011484.1-201ENST00000377652 1995 ntBASIC18.03■□□□□ 0.48
UBL3O95164 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
UBL3O95164 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBL3O95164 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.03■□□□□ 0.48
UBL3O95164 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBL3O95164 AC026185.1-201ENST00000445748 174 ntBASIC18.03■□□□□ 0.48
UBL3O95164 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.03■□□□□ 0.48
UBL3O95164 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.03■□□□□ 0.48
UBL3O95164 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
UBL3O95164 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.03■□□□□ 0.48
UBL3O95164 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.03■□□□□ 0.48
UBL3O95164 AC121338.2-201ENST00000622535 1744 ntBASIC18.03■□□□□ 0.48
UBL3O95164 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBL3O95164 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBL3O95164 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBL3O95164 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBL3O95164 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
UBL3O95164 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
UBL3O95164 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UBL3O95164 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
UBL3O95164 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
UBL3O95164 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UBL3O95164 AL162377.1-201ENST00000618844 1793 ntBASIC18.02■□□□□ 0.48
UBL3O95164 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UBL3O95164 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBL3O95164 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBL3O95164 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
UBL3O95164 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBL3O95164 CDCA4P2-201ENST00000441182 718 ntBASIC18.02■□□□□ 0.48
UBL3O95164 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBL3O95164 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.02■□□□□ 0.48
UBL3O95164 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
UBL3O95164 FAM21FP-204ENST00000608637 956 ntBASIC18.02■□□□□ 0.48
UBL3O95164 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms