Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNRNP200O75643 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNRNP200O75643 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.35■□□□□ 0.69
SNRNP200O75643 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.35■□□□□ 0.69
SNRNP200O75643 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.35■□□□□ 0.69
SNRNP200O75643 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.35■□□□□ 0.69
SNRNP200O75643 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNRNP200O75643 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.35■□□□□ 0.69
SNRNP200O75643 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNRNP200O75643 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNRNP200O75643 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNRNP200O75643 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SNRNP200O75643 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.35■□□□□ 0.69
SNRNP200O75643 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNRNP200O75643 LINC01006-201ENST00000333319 2292 ntBASIC19.35■□□□□ 0.69
SNRNP200O75643 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.34■□□□□ 0.69
SNRNP200O75643 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.34■□□□□ 0.69
SNRNP200O75643 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.34■□□□□ 0.69
SNRNP200O75643 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SNRNP200O75643 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.34■□□□□ 0.69
SNRNP200O75643 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.34■□□□□ 0.69
SNRNP200O75643 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.34■□□□□ 0.69
SNRNP200O75643 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNRNP200O75643 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.34■□□□□ 0.69
SNRNP200O75643 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNRNP200O75643 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNRNP200O75643 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNRNP200O75643 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SNRNP200O75643 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNRNP200O75643 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNRNP200O75643 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.34■□□□□ 0.69
SNRNP200O75643 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.34■□□□□ 0.69
SNRNP200O75643 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
SNRNP200O75643 C2orf69P4-201ENST00000565394 541 ntBASIC19.34■□□□□ 0.69
SNRNP200O75643 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SNRNP200O75643 AC008687.6-201ENST00000596318 630 ntBASIC19.34■□□□□ 0.69
SNRNP200O75643 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.34■□□□□ 0.69
SNRNP200O75643 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNRNP200O75643 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.33■□□□□ 0.69
SNRNP200O75643 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.33■□□□□ 0.69
SNRNP200O75643 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
SNRNP200O75643 FEM1AP1-201ENST00000431297 1995 ntBASIC19.33■□□□□ 0.69
SNRNP200O75643 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNRNP200O75643 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.33■□□□□ 0.69
SNRNP200O75643 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SNRNP200O75643 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SNRNP200O75643 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.33■□□□□ 0.69
SNRNP200O75643 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.33■□□□□ 0.69
SNRNP200O75643 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNRNP200O75643 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
SNRNP200O75643 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.33■□□□□ 0.69
SNRNP200O75643 SOX15-203ENST00000570788 1093 ntBASIC19.33■□□□□ 0.69
SNRNP200O75643 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SNRNP200O75643 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.33■□□□□ 0.68
SNRNP200O75643 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNRNP200O75643 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.33■□□□□ 0.68
SNRNP200O75643 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNRNP200O75643 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SNRNP200O75643 AC142381.4-202ENST00000563973 229 ntBASIC19.33■□□□□ 0.68
SNRNP200O75643 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SNRNP200O75643 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SNRNP200O75643 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SNRNP200O75643 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNRNP200O75643 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNRNP200O75643 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNRNP200O75643 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNRNP200O75643 AL391422.3-201ENST00000603791 2761 ntBASIC19.32■□□□□ 0.68
SNRNP200O75643 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNRNP200O75643 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.32■□□□□ 0.68
SNRNP200O75643 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNRNP200O75643 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.32■□□□□ 0.68
SNRNP200O75643 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.32■□□□□ 0.68
SNRNP200O75643 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNRNP200O75643 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNRNP200O75643 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRNP200O75643 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRNP200O75643 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.31■□□□□ 0.68
SNRNP200O75643 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNRNP200O75643 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRNP200O75643 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRNP200O75643 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.31■□□□□ 0.68
SNRNP200O75643 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SNRNP200O75643 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.31■□□□□ 0.68
SNRNP200O75643 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRNP200O75643 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SNRNP200O75643 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRNP200O75643 AL512408.1-201ENST00000569378 2000 ntBASIC19.31■□□□□ 0.68
SNRNP200O75643 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRNP200O75643 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRNP200O75643 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRNP200O75643 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.31■□□□□ 0.68
SNRNP200O75643 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.31■□□□□ 0.68
SNRNP200O75643 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SNRNP200O75643 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.31■□□□□ 0.68
SNRNP200O75643 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SNRNP200O75643 AC006058.3-201ENST00000606217 1069 ntBASIC19.31■□□□□ 0.68
SNRNP200O75643 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRNP200O75643 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.31■□□□□ 0.68
SNRNP200O75643 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNRNP200O75643 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms