Protein–RNA interactions for Protein: O75317

USP12, Ubiquitin carboxyl-terminal hydrolase 12, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP12O75317 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP12O75317 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
USP12O75317 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
USP12O75317 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
USP12O75317 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.6■□□□□ 0.89
USP12O75317 FAM21FP-204ENST00000608637 956 ntBASIC20.6■□□□□ 0.89
USP12O75317 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.6■□□□□ 0.89
USP12O75317 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
USP12O75317 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP12O75317 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP12O75317 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.6■□□□□ 0.89
USP12O75317 KRT8P36-201ENST00000489121 1440 ntBASIC20.6■□□□□ 0.89
USP12O75317 AC068338.2-201ENST00000563278 1430 ntBASIC20.6■□□□□ 0.89
USP12O75317 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
USP12O75317 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.6■□□□□ 0.89
USP12O75317 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.6■□□□□ 0.89
USP12O75317 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.59■□□□□ 0.89
USP12O75317 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP12O75317 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
USP12O75317 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.59■□□□□ 0.89
USP12O75317 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
USP12O75317 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP12O75317 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP12O75317 AC099778.1-201ENST00000568593 1911 ntBASIC20.59■□□□□ 0.89
USP12O75317 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP12O75317 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.59■□□□□ 0.89
USP12O75317 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.59■□□□□ 0.89
USP12O75317 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.59■□□□□ 0.89
USP12O75317 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.59■□□□□ 0.89
USP12O75317 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.59■□□□□ 0.89
USP12O75317 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP12O75317 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP12O75317 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP12O75317 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
USP12O75317 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
USP12O75317 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP12O75317 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.59■□□□□ 0.89
USP12O75317 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP12O75317 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.58■□□□□ 0.89
USP12O75317 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.89
USP12O75317 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP12O75317 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
USP12O75317 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.58■□□□□ 0.89
USP12O75317 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP12O75317 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP12O75317 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP12O75317 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
USP12O75317 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
USP12O75317 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP12O75317 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP12O75317 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP12O75317 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP12O75317 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.58■□□□□ 0.89
USP12O75317 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.58■□□□□ 0.88
USP12O75317 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
USP12O75317 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.58■□□□□ 0.88
USP12O75317 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP12O75317 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
USP12O75317 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
USP12O75317 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.57■□□□□ 0.88
USP12O75317 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.57■□□□□ 0.88
USP12O75317 CYP21A1P-202ENST00000354927 1481 ntBASIC20.57■□□□□ 0.88
USP12O75317 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP12O75317 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP12O75317 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP12O75317 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.57■□□□□ 0.88
USP12O75317 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
USP12O75317 AC133552.2-202ENST00000575694 574 ntBASIC20.57■□□□□ 0.88
USP12O75317 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.57■□□□□ 0.88
USP12O75317 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.57■□□□□ 0.88
USP12O75317 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
USP12O75317 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP12O75317 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.57■□□□□ 0.88
USP12O75317 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
USP12O75317 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP12O75317 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP12O75317 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP12O75317 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP12O75317 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP12O75317 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.56■□□□□ 0.88
USP12O75317 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP12O75317 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.56■□□□□ 0.88
USP12O75317 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.56■□□□□ 0.88
USP12O75317 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
USP12O75317 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.56■□□□□ 0.88
USP12O75317 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
USP12O75317 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
USP12O75317 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP12O75317 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP12O75317 AFG3L1P-217ENST00000557444 2447 ntBASIC20.56■□□□□ 0.88
USP12O75317 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP12O75317 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP12O75317 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
USP12O75317 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP12O75317 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP12O75317 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.56■□□□□ 0.88
USP12O75317 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP12O75317 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP12O75317 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.55■□□□□ 0.88
USP12O75317 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms