Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.6■□□□□ 0.89
SYNCRIPO60506 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNCRIPO60506 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNCRIPO60506 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.6■□□□□ 0.89
SYNCRIPO60506 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNCRIPO60506 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNCRIPO60506 AC233263.1-201ENST00000578059 224 ntBASIC20.6■□□□□ 0.89
SYNCRIPO60506 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SYNCRIPO60506 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNCRIPO60506 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNCRIPO60506 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
SYNCRIPO60506 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYNCRIPO60506 AC011484.1-201ENST00000377652 1995 ntBASIC20.59■□□□□ 0.89
SYNCRIPO60506 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SYNCRIPO60506 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
SYNCRIPO60506 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SYNCRIPO60506 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.59■□□□□ 0.89
SYNCRIPO60506 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.59■□□□□ 0.89
SYNCRIPO60506 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.59■□□□□ 0.89
SYNCRIPO60506 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.59■□□□□ 0.89
SYNCRIPO60506 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYNCRIPO60506 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.59■□□□□ 0.89
SYNCRIPO60506 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SYNCRIPO60506 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYNCRIPO60506 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.59■□□□□ 0.89
SYNCRIPO60506 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYNCRIPO60506 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.59■□□□□ 0.89
SYNCRIPO60506 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYNCRIPO60506 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SYNCRIPO60506 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYNCRIPO60506 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
SYNCRIPO60506 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYNCRIPO60506 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.58■□□□□ 0.89
SYNCRIPO60506 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SYNCRIPO60506 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
SYNCRIPO60506 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.58■□□□□ 0.89
SYNCRIPO60506 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYNCRIPO60506 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SYNCRIPO60506 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SYNCRIPO60506 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.58■□□□□ 0.89
SYNCRIPO60506 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SYNCRIPO60506 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SYNCRIPO60506 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.58■□□□□ 0.89
SYNCRIPO60506 MIR718-201ENST00000390190 70 ntBASIC20.58■□□□□ 0.89
SYNCRIPO60506 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.58■□□□□ 0.89
SYNCRIPO60506 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SYNCRIPO60506 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.58■□□□□ 0.89
SYNCRIPO60506 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.58■□□□□ 0.89
SYNCRIPO60506 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SYNCRIPO60506 AC005829.2-201ENST00000571422 1056 ntBASIC20.58■□□□□ 0.89
SYNCRIPO60506 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.58■□□□□ 0.89
SYNCRIPO60506 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.58■□□□□ 0.89
SYNCRIPO60506 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SYNCRIPO60506 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SYNCRIPO60506 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SYNCRIPO60506 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNCRIPO60506 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYNCRIPO60506 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNCRIPO60506 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYNCRIPO60506 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNCRIPO60506 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNCRIPO60506 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNCRIPO60506 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SYNCRIPO60506 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.57■□□□□ 0.88
SYNCRIPO60506 AL596275.1-201ENST00000423464 877 ntBASIC20.57■□□□□ 0.88
SYNCRIPO60506 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.57■□□□□ 0.88
SYNCRIPO60506 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYNCRIPO60506 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.57■□□□□ 0.88
SYNCRIPO60506 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.57■□□□□ 0.88
SYNCRIPO60506 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.57■□□□□ 0.88
SYNCRIPO60506 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYNCRIPO60506 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNCRIPO60506 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.57■□□□□ 0.88
SYNCRIPO60506 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNCRIPO60506 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNCRIPO60506 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYNCRIPO60506 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNCRIPO60506 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNCRIPO60506 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SYNCRIPO60506 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNCRIPO60506 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SYNCRIPO60506 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYNCRIPO60506 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNCRIPO60506 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SYNCRIPO60506 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYNCRIPO60506 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.56■□□□□ 0.88
SYNCRIPO60506 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.56■□□□□ 0.88
SYNCRIPO60506 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.56■□□□□ 0.88
SYNCRIPO60506 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.56■□□□□ 0.88
SYNCRIPO60506 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYNCRIPO60506 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.56■□□□□ 0.88
SYNCRIPO60506 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.56■□□□□ 0.88
SYNCRIPO60506 AC006557.6-201ENST00000623071 864 ntBASIC20.56■□□□□ 0.88
SYNCRIPO60506 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNCRIPO60506 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYNCRIPO60506 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYNCRIPO60506 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNCRIPO60506 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.56■□□□□ 0.88
SYNCRIPO60506 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.56■□□□□ 0.88
SYNCRIPO60506 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms