Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX5O60225 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX5O60225 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.23■□□□□ 0.35
SSX5O60225 AC008764.7-201ENST00000593779 1081 ntBASIC17.23■□□□□ 0.35
SSX5O60225 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSX5O60225 RARRES2P11-201ENST00000635158 484 ntBASIC17.23■□□□□ 0.35
SSX5O60225 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX5O60225 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX5O60225 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SSX5O60225 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SSX5O60225 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX5O60225 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSX5O60225 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX5O60225 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSX5O60225 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSX5O60225 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SSX5O60225 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX5O60225 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSX5O60225 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX5O60225 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSX5O60225 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SSX5O60225 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
SSX5O60225 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SSX5O60225 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX5O60225 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX5O60225 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX5O60225 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.22■□□□□ 0.35
SSX5O60225 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.22■□□□□ 0.35
SSX5O60225 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SSX5O60225 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.22■□□□□ 0.35
SSX5O60225 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX5O60225 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSX5O60225 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX5O60225 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSX5O60225 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX5O60225 AL136116.3-201ENST00000402907 1138 ntBASIC17.22■□□□□ 0.35
SSX5O60225 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.22■□□□□ 0.35
SSX5O60225 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SSX5O60225 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.22■□□□□ 0.35
SSX5O60225 AL136162.1-201ENST00000607711 1078 ntBASIC17.22■□□□□ 0.35
SSX5O60225 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.22■□□□□ 0.35
SSX5O60225 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX5O60225 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX5O60225 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSX5O60225 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSX5O60225 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.22■□□□□ 0.35
SSX5O60225 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSX5O60225 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.21■□□□□ 0.35
SSX5O60225 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX5O60225 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.21■□□□□ 0.35
SSX5O60225 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SSX5O60225 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX5O60225 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX5O60225 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SSX5O60225 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.21■□□□□ 0.35
SSX5O60225 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SSX5O60225 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX5O60225 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX5O60225 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX5O60225 BX323043.1-201ENST00000641006 1765 ntBASIC17.21■□□□□ 0.35
SSX5O60225 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX5O60225 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX5O60225 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.21■□□□□ 0.35
SSX5O60225 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX5O60225 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SSX5O60225 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.21■□□□□ 0.35
SSX5O60225 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.21■□□□□ 0.35
SSX5O60225 MIR2861-201ENST00000636310 90 ntBASIC17.21■□□□□ 0.35
SSX5O60225 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX5O60225 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX5O60225 AC098818.2-201ENST00000564925 2320 ntBASIC17.21■□□□□ 0.35
SSX5O60225 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.21■□□□□ 0.35
SSX5O60225 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX5O60225 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX5O60225 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.21■□□□□ 0.34
SSX5O60225 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SSX5O60225 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
SSX5O60225 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX5O60225 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX5O60225 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSX5O60225 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.2■□□□□ 0.34
SSX5O60225 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX5O60225 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSX5O60225 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.2■□□□□ 0.34
SSX5O60225 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX5O60225 AC120498.9-201ENST00000339021 3867 ntBASIC17.2■□□□□ 0.34
SSX5O60225 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX5O60225 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX5O60225 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX5O60225 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX5O60225 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX5O60225 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX5O60225 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX5O60225 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SSX5O60225 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX5O60225 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SSX5O60225 AC099791.1-201ENST00000416440 715 ntBASIC17.2■□□□□ 0.34
SSX5O60225 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSX5O60225 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.2■□□□□ 0.34
SSX5O60225 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms