Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.2■□□□□ 0.5
SURF4O15260 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
SURF4O15260 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SURF4O15260 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SURF4O15260 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SURF4O15260 AC007322.3-201ENST00000426526 701 ntBASIC18.19■□□□□ 0.5
SURF4O15260 AC034268.1-201ENST00000441047 882 ntBASIC18.19■□□□□ 0.5
SURF4O15260 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.19■□□□□ 0.5
SURF4O15260 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.19■□□□□ 0.5
SURF4O15260 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.19■□□□□ 0.5
SURF4O15260 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.19■□□□□ 0.5
SURF4O15260 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SURF4O15260 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.19■□□□□ 0.5
SURF4O15260 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.19■□□□□ 0.5
SURF4O15260 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SURF4O15260 AC243732.1-201ENST00000612648 864 ntBASIC18.19■□□□□ 0.5
SURF4O15260 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SURF4O15260 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.19■□□□□ 0.5
SURF4O15260 BX119927.1-201ENST00000636596 1552 ntBASIC18.19■□□□□ 0.5
SURF4O15260 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.19■□□□□ 0.5
SURF4O15260 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SURF4O15260 AC018445.3-201ENST00000624177 1945 ntBASIC18.19■□□□□ 0.5
SURF4O15260 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
SURF4O15260 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
SURF4O15260 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SURF4O15260 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SURF4O15260 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SURF4O15260 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SURF4O15260 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SURF4O15260 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
SURF4O15260 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SURF4O15260 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SURF4O15260 BX323043.1-201ENST00000641006 1765 ntBASIC18.18■□□□□ 0.5
SURF4O15260 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SURF4O15260 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SURF4O15260 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.18■□□□□ 0.5
SURF4O15260 KRT18P20-201ENST00000548986 1279 ntBASIC18.18■□□□□ 0.5
SURF4O15260 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.18■□□□□ 0.5
SURF4O15260 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SURF4O15260 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.18■□□□□ 0.5
SURF4O15260 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SURF4O15260 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SURF4O15260 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SURF4O15260 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.18■□□□□ 0.5
SURF4O15260 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.18■□□□□ 0.5
SURF4O15260 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SURF4O15260 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SURF4O15260 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.18■□□□□ 0.5
SURF4O15260 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SURF4O15260 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SURF4O15260 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SURF4O15260 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SURF4O15260 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.17■□□□□ 0.5
SURF4O15260 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SURF4O15260 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SURF4O15260 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.17■□□□□ 0.5
SURF4O15260 RBM17P2-201ENST00000616397 1405 ntBASIC18.17■□□□□ 0.5
SURF4O15260 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.17■□□□□ 0.5
SURF4O15260 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SURF4O15260 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SURF4O15260 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SURF4O15260 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SURF4O15260 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.17■□□□□ 0.5
SURF4O15260 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.17■□□□□ 0.5
SURF4O15260 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.17■□□□□ 0.5
SURF4O15260 TERF1P2-201ENST00000583350 1212 ntBASIC18.17■□□□□ 0.5
SURF4O15260 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.17■□□□□ 0.5
SURF4O15260 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.17■□□□□ 0.5
SURF4O15260 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.17■□□□□ 0.5
SURF4O15260 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.17■□□□□ 0.5
SURF4O15260 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.17■□□□□ 0.5
SURF4O15260 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SURF4O15260 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.16■□□□□ 0.5
SURF4O15260 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SURF4O15260 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SURF4O15260 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SURF4O15260 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SURF4O15260 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SURF4O15260 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SURF4O15260 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SURF4O15260 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.16■□□□□ 0.5
SURF4O15260 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SURF4O15260 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SURF4O15260 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SURF4O15260 AC026271.2-201ENST00000428091 497 ntBASIC18.16■□□□□ 0.5
SURF4O15260 KRT18P14-201ENST00000534205 1250 ntBASIC18.16■□□□□ 0.5
SURF4O15260 FAM21FP-204ENST00000608637 956 ntBASIC18.16■□□□□ 0.5
SURF4O15260 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SURF4O15260 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SURF4O15260 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SURF4O15260 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SURF4O15260 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SURF4O15260 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SURF4O15260 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.16■□□□□ 0.5
SURF4O15260 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SURF4O15260 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SURF4O15260 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SURF4O15260 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SURF4O15260 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SURF4O15260 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms