Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 YAR053WYAR053W 297 nt0.27□□□□□ -2.37
TY1B-HO13535 ATP20YPR020W 348 nt0.27□□□□□ -2.37
TY1B-HO13535 HNT1YDL125C 477 nt0.27□□□□□ -2.37
TY1B-HO13535 IRC2YDR112W 309 nt0.27□□□□□ -2.37
TY1B-HO13535 CYC7YEL039C 342 nt0.27□□□□□ -2.37
TY1B-HO13535 SWF1YDR126W 1011 nt0.26□□□□□ -2.37
TY1B-HO13535 BMT5YIL096C 1011 nt0.26□□□□□ -2.37
TY1B-HO13535 VPS52YDR484W 1926 nt0.26□□□□□ -2.37
TY1B-HO13535 SPC2YML055W 537 nt0.25□□□□□ -2.37
TY1B-HO13535 DBP6YNR038W 1890 nt0.25□□□□□ -2.37
TY1B-HO13535 REF2YDR195W 1602 nt0.25□□□□□ -2.37
TY1B-HO13535 PDE2YOR360C 1581 nt0.24□□□□□ -2.37
TY1B-HO13535 YPL119C-AYPL119C-A 264 nt0.24□□□□□ -2.37
TY1B-HO13535 PIG1YLR273C 1947 nt0.24□□□□□ -2.37
TY1B-HO13535 YER038W-AYER038W-A 381 nt0.24□□□□□ -2.37
TY1B-HO13535 ISD11YER048W-A 285 nt0.24□□□□□ -2.37
TY1B-HO13535 IRC13YOR235W 315 nt0.24□□□□□ -2.37
TY1B-HO13535 PXA2YKL188C 2562 nt0.23□□□□□ -2.37
TY1B-HO13535 SRB7YDR308C 423 nt0.23□□□□□ -2.37
TY1B-HO13535 SDH2YLL041C 801 nt0.23□□□□□ -2.37
TY1B-HO13535 RPL37AYLR185W 267 nt0.23□□□□□ -2.37
TY1B-HO13535 YOR199WYOR199W 330 nt0.23□□□□□ -2.37
TY1B-HO13535 RPS30AYLR287C-A 192 nt0.22□□□□□ -2.37
TY1B-HO13535 GIM5YML094W 492 nt0.22□□□□□ -2.37
TY1B-HO13535 YMR324CYMR324C 243 nt0.22□□□□□ -2.37
TY1B-HO13535 ATC1YDR184C 885 nt0.22□□□□□ -2.37
TY1B-HO13535 SLM6YBR266C 453 nt0.22□□□□□ -2.37
TY1B-HO13535 YDL206WYDL206W 2289 nt0.21□□□□□ -2.38
TY1B-HO13535 YBR184WYBR184W 1572 nt0.21□□□□□ -2.38
TY1B-HO13535 SPO11YHL022C 1197 nt0.21□□□□□ -2.38
TY1B-HO13535 YHR063W-AYHR063W-A 336 nt0.21□□□□□ -2.38
TY1B-HO13535 YOL106WYOL106W 354 nt0.21□□□□□ -2.38
TY1B-HO13535 snR13snR13 124 nt0.21□□□□□ -2.38
TY1B-HO13535 MMS4YBR098W 2076 nt0.21□□□□□ -2.38
TY1B-HO13535 NPR2YEL062W 1848 nt0.21□□□□□ -2.38
TY1B-HO13535 ALG13YGL047W 609 nt0.2□□□□□ -2.38
TY1B-HO13535 YOR053WYOR053W 342 nt0.2□□□□□ -2.38
TY1B-HO13535 YOR366WYOR366W 354 nt0.2□□□□□ -2.38
TY1B-HO13535 BFR2YDR299W 1605 nt0.2□□□□□ -2.38
TY1B-HO13535 ZIP1YDR285W 2628 nt0.2□□□□□ -2.38
TY1B-HO13535 SRP14YDL092W 441 nt0.19□□□□□ -2.38
TY1B-HO13535 YJR140W-AYJR140W-A 150 nt0.19□□□□□ -2.38
TY1B-HO13535 UPS1YLR193C 528 nt0.19□□□□□ -2.38
TY1B-HO13535 snR79snR79 84 nt0.18□□□□□ -2.38
TY1B-HO13535 YDL152WYDL152W 366 nt0.18□□□□□ -2.38
TY1B-HO13535 LOC1YFR001W 615 nt0.18□□□□□ -2.38
TY1B-HO13535 TAD1YGL243W 1203 nt0.18□□□□□ -2.38
TY1B-HO13535 YGR270C-AYGR270C-A 219 nt0.18□□□□□ -2.38
TY1B-HO13535 YHR028W-AYHR028W-A 321 nt0.18□□□□□ -2.38
TY1B-HO13535 POL32YJR043C 1053 nt0.18□□□□□ -2.38
TY1B-HO13535 RRT1YBL048W 312 nt0.18□□□□□ -2.38
TY1B-HO13535 MRPL50YNR022C 420 nt0.18□□□□□ -2.38
TY1B-HO13535 YPR099CYPR099C 357 nt0.18□□□□□ -2.38
TY1B-HO13535 LCD1YDR499W 2244 nt0.17□□□□□ -2.38
TY1B-HO13535 YBL068W-AYBL068W-A 237 nt0.17□□□□□ -2.38
TY1B-HO13535 YBR221W-AYBR221W-A 105 nt0.17□□□□□ -2.38
TY1B-HO13535 MKT1YNL085W 2493 nt0.17□□□□□ -2.38
TY1B-HO13535 ABF2YMR072W 552 nt0.17□□□□□ -2.38
TY1B-HO13535 UTP10YJL109C 5310 nt0.17□□□□□ -2.38
TY1B-HO13535 IPI3YNL182C 1668 nt0.16□□□□□ -2.38
TY1B-HO13535 YHR050W-AYHR050W-A 171 nt0.16□□□□□ -2.38
TY1B-HO13535 YIL030W-AYIL030W-A 339 nt0.16□□□□□ -2.38
TY1B-HO13535 RPS24BYIL069C 408 nt0.16□□□□□ -2.38
TY1B-HO13535 YOP1YPR028W 543 nt0.16□□□□□ -2.38
TY1B-HO13535 SPO23YBR250W 1572 nt0.16□□□□□ -2.38
TY1B-HO13535 SLI15YBR156C 2097 nt0.15□□□□□ -2.38
TY1B-HO13535 SLD3YGL113W 2007 nt0.15□□□□□ -2.38
TY1B-HO13535 GPG1YGL121C 381 nt0.15□□□□□ -2.39
TY1B-HO13535 GMC2YLR445W 567 nt0.15□□□□□ -2.39
TY1B-HO13535 LIN1YHR156C 1023 nt0.14□□□□□ -2.39
TY1B-HO13535 YGL204CYGL204C 306 nt0.14□□□□□ -2.39
TY1B-HO13535 RPL32YBL092W 393 nt0.14□□□□□ -2.39
TY1B-HO13535 CHS6YJL099W 2241 nt0.13□□□□□ -2.39
TY1B-HO13535 OCA6YDR067C 675 nt0.13□□□□□ -2.39
TY1B-HO13535 YGR042WYGR042W 816 nt0.13□□□□□ -2.39
TY1B-HO13535 YMR304C-AYMR304C-A 351 nt0.13□□□□□ -2.39
TY1B-HO13535 RPS7BYNL096C 573 nt0.13□□□□□ -2.39
TY1B-HO13535 ENV11YGR071C 2583 nt0.12□□□□□ -2.39
TY1B-HO13535 LSO2YGR169C-A 279 nt0.12□□□□□ -2.39
TY1B-HO13535 ACF4YJR083C 930 nt0.12□□□□□ -2.39
TY1B-HO13535 GLG1YKR058W 1851 nt0.12□□□□□ -2.39
TY1B-HO13535 YOL013W-AYOL013W-A 192 nt0.12□□□□□ -2.39
TY1B-HO13535 YPL197CYPL197C 414 nt0.12□□□□□ -2.39
TY1B-HO13535 YEL030C-AYEL030C-A 315 nt0.11□□□□□ -2.39
TY1B-HO13535 AI5_ALPHAQ0070 1893 nt0.11□□□□□ -2.39
TY1B-HO13535 YDR182W-AYDR182W-A 204 nt0.11□□□□□ -2.39
TY1B-HO13535 ULI1YFR026C 510 nt0.11□□□□□ -2.39
TY1B-HO13535 RRI2YOL117W 1938 nt0.1□□□□□ -2.39
TY1B-HO13535 tT(UGU)Q1tT(UGU)Q1 76 nt0.1□□□□□ -2.39
TY1B-HO13535 RSM23YGL129C 1353 nt0.1□□□□□ -2.39
TY1B-HO13535 BI4Q0120 1917 nt0.1□□□□□ -2.39
TY1B-HO13535 TIM8YJR135W-A 264 nt0.09□□□□□ -2.39
TY1B-HO13535 KAR1YNL188W 1302 nt0.09□□□□□ -2.4
TY1B-HO13535 HTB1YDR224C 396 nt0.09□□□□□ -2.4
TY1B-HO13535 YER188C-AYER188C-A 300 nt0.09□□□□□ -2.4
TY1B-HO13535 RSM27YGR215W 333 nt0.09□□□□□ -2.4
TY1B-HO13535 RPC10YHR143W-A 213 nt0.09□□□□□ -2.4
TY1B-HO13535 YBR121C-AYBR121C-A 159 nt0.09□□□□□ -2.4
TY1B-HO13535 PET111YMR257C 2403 nt0.08□□□□□ -2.4
TY1B-HO13535 snR84snR84 550 nt0.08□□□□□ -2.4
Retrieved 100 of 7,029 protein–RNA pairs in 90 ms