Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.72■■□□□ 1.23
DDX39AO00148 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
DDX39AO00148 AC005829.2-201ENST00000571422 1056 ntBASIC22.72■■□□□ 1.23
DDX39AO00148 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.72■■□□□ 1.23
DDX39AO00148 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.72■■□□□ 1.23
DDX39AO00148 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
DDX39AO00148 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
DDX39AO00148 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.72■■□□□ 1.23
DDX39AO00148 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
DDX39AO00148 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.72■■□□□ 1.23
DDX39AO00148 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
DDX39AO00148 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX39AO00148 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX39AO00148 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX39AO00148 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX39AO00148 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
DDX39AO00148 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX39AO00148 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX39AO00148 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX39AO00148 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.71■■□□□ 1.23
DDX39AO00148 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX39AO00148 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.71■■□□□ 1.23
DDX39AO00148 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
DDX39AO00148 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
DDX39AO00148 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX39AO00148 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
DDX39AO00148 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX39AO00148 AL390719.1-204ENST00000412397 1219 ntBASIC22.7■■□□□ 1.22
DDX39AO00148 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.7■■□□□ 1.22
DDX39AO00148 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.7■■□□□ 1.22
DDX39AO00148 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
DDX39AO00148 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
DDX39AO00148 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.7■■□□□ 1.22
DDX39AO00148 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
DDX39AO00148 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX39AO00148 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.7■■□□□ 1.22
DDX39AO00148 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.7■■□□□ 1.22
DDX39AO00148 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
DDX39AO00148 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX39AO00148 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX39AO00148 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX39AO00148 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX39AO00148 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
DDX39AO00148 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX39AO00148 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
DDX39AO00148 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX39AO00148 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.69■■□□□ 1.22
DDX39AO00148 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.69■■□□□ 1.22
DDX39AO00148 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
DDX39AO00148 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.69■■□□□ 1.22
DDX39AO00148 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.69■■□□□ 1.22
DDX39AO00148 RPS2P52-201ENST00000469610 820 ntBASIC22.69■■□□□ 1.22
DDX39AO00148 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
DDX39AO00148 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.69■■□□□ 1.22
DDX39AO00148 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.69■■□□□ 1.22
DDX39AO00148 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX39AO00148 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX39AO00148 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.69■■□□□ 1.22
DDX39AO00148 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX39AO00148 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
DDX39AO00148 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.69■■□□□ 1.22
DDX39AO00148 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX39AO00148 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX39AO00148 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
DDX39AO00148 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.68■■□□□ 1.22
DDX39AO00148 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX39AO00148 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
DDX39AO00148 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.68■■□□□ 1.22
DDX39AO00148 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
DDX39AO00148 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX39AO00148 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
DDX39AO00148 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.68■■□□□ 1.22
DDX39AO00148 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX39AO00148 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
DDX39AO00148 KRT17P3-201ENST00000420566 1262 ntBASIC22.68■■□□□ 1.22
DDX39AO00148 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.68■■□□□ 1.22
DDX39AO00148 AL158047.1-201ENST00000445918 881 ntBASIC22.68■■□□□ 1.22
DDX39AO00148 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.68■■□□□ 1.22
DDX39AO00148 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.68■■□□□ 1.22
DDX39AO00148 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX39AO00148 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.68■■□□□ 1.22
DDX39AO00148 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX39AO00148 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.68■■□□□ 1.22
DDX39AO00148 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.68■■□□□ 1.22
DDX39AO00148 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX39AO00148 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX39AO00148 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.67■■□□□ 1.22
DDX39AO00148 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX39AO00148 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.67■■□□□ 1.22
DDX39AO00148 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.67■■□□□ 1.22
DDX39AO00148 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX39AO00148 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX39AO00148 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX39AO00148 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.67■■□□□ 1.22
DDX39AO00148 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
DDX39AO00148 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
DDX39AO00148 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.67■■□□□ 1.22
DDX39AO00148 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.67■■□□□ 1.22
DDX39AO00148 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.67■■□□□ 1.22
DDX39AO00148 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms