Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 SOX15-203ENST00000570788 1093 ntBASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 AC006058.3-201ENST00000606217 1069 ntBASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 FP700111.2-201ENST00000619190 1892 ntBASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 ITM2C-210ENST00000620962 501 ntBASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IGHV4-28A0A0C4DH34 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 UNC93B4-201ENST00000505679 747 ntBASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 EFS-203ENST00000429593 2610 ntTSL 2 BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
IGHV4-28A0A0C4DH34 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 AL390719.1-204ENST00000412397 1219 ntBASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms