Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV41A0A0B4J266 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV41A0A0B4J266 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV41A0A0B4J266 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV41A0A0B4J266 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV41A0A0B4J266 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
TRAV41A0A0B4J266 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAV41A0A0B4J266 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV41A0A0B4J266 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRAV41A0A0B4J266 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRAV41A0A0B4J266 MYC-209ENST00000641252 345 ntBASIC15.88■□□□□ 0.13
TRAV41A0A0B4J266 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV41A0A0B4J266 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV41A0A0B4J266 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV41A0A0B4J266 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV41A0A0B4J266 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV41A0A0B4J266 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRAV41A0A0B4J266 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV41A0A0B4J266 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 DPP3P2-201ENST00000416030 1696 ntBASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 AC020907.5-201ENST00000624372 1936 ntBASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 FEM1AP1-201ENST00000431297 1995 ntBASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV41A0A0B4J266 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 AC083880.1-201ENST00000608266 535 ntBASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV41A0A0B4J266 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 AC073314.1-201ENST00000568729 2216 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms