Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AC245052.3-201ENST00000450182 901 ntBASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-1A0A0A6YYK1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AL691432.2-201ENST00000607222 2038 ntBASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-1A0A0A6YYK1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AP001330.3-201ENST00000520123 633 ntBASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AC020763.4-201ENST00000623414 4170 ntBASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 BX323043.1-201ENST00000641006 1765 ntBASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AC004408.2-201ENST00000623613 2777 ntBASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-1A0A0A6YYK1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms