Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV30A0A087WSZ9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 HCG11-201ENST00000411553 5696 ntBASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 KRT8P36-201ENST00000489121 1440 ntBASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV30A0A087WSZ9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV30A0A087WSZ9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 AC099778.1-201ENST00000568593 1911 ntBASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV30A0A087WSZ9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms