Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 SNAPC2-203ENST00000595035 576 ntTSL 38.21□□□□□ -1.099e-6■■□□□ 12.6
PRPF8Q6P2Q9 ADAM15-214ENST00000468053 367 ntTSL 58.2□□□□□ -1.19e-6■■□□□ 12.6
PRPF8Q6P2Q9 APOL1-202ENST00000397278 2918 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.119e-7■■□□□ 12.6
PRPF8Q6P2Q9 TBC1D5-205ENST00000415814 852 ntTSL 38.09□□□□□ -1.119e-6■■□□□ 12.6
PRPF8Q6P2Q9 EFCAB2-207ENST00000447569 527 ntTSL 2 BASIC8.09□□□□□ -1.119e-6■■□□□ 12.6
PRPF8Q6P2Q9 AIG1-202ENST00000357847 1395 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.122e-8■■□□□ 12.6
PRPF8Q6P2Q9 PVT1-207ENST00000518528 624 ntTSL 38.08□□□□□ -1.121e-10■■□□□ 12.6
PRPF8Q6P2Q9 KDM8-205ENST00000563571 581 ntTSL 48.08□□□□□ -1.129e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF101-205ENST00000541458 575 ntTSL 48.07□□□□□ -1.129e-6■■□□□ 12.6
PRPF8Q6P2Q9 NREP-201ENST00000257435 2013 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.133e-18■■□□□ 12.6
PRPF8Q6P2Q9 LINC00969-261ENST00000625882 484 ntTSL 58□□□□□ -1.139e-6■■□□□ 12.6
PRPF8Q6P2Q9 ARSI-202ENST00000509146 472 ntTSL 47.99□□□□□ -1.133e-8■■□□□ 12.6
PRPF8Q6P2Q9 ZNF720-201ENST00000316491 2769 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.139e-6■■□□□ 12.6
PRPF8Q6P2Q9 NREP-205ENST00000446294 2065 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.133e-18■■□□□ 12.6
PRPF8Q6P2Q9 FLT3LG-203ENST00000594009 1076 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.149e-6■■□□□ 12.6
PRPF8Q6P2Q9 TARBP2-208ENST00000547541 430 ntTSL 37.91□□□□□ -1.143e-8■■□□□ 12.6
PRPF8Q6P2Q9 NREP-203ENST00000395634 1468 ntTSL 2 BASIC7.9□□□□□ -1.143e-18■■□□□ 12.6
PRPF8Q6P2Q9 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.159e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF714-205ENST00000610902 2671 ntTSL 27.87□□□□□ -1.159e-6■■□□□ 12.6
PRPF8Q6P2Q9 TBC1D5-220ENST00000446863 557 ntTSL 47.86□□□□□ -1.159e-6■■□□□ 12.6
PRPF8Q6P2Q9 DOCK5-207ENST00000479547 1042 ntTSL 57.86□□□□□ -1.158e-12■■□□□ 12.6
PRPF8Q6P2Q9 EFCAB2-211ENST00000487845 1389 ntTSL 27.74□□□□□ -1.179e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF232-203ENST00000571076 581 ntTSL 37.73□□□□□ -1.173e-8■■□□□ 12.6
PRPF8Q6P2Q9 MKLN1-AS-201ENST00000416220 561 ntTSL 57.72□□□□□ -1.179e-6■■□□□ 12.6
PRPF8Q6P2Q9 APOL1-203ENST00000397279 1564 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.199e-7■■□□□ 12.6
PRPF8Q6P2Q9 AIG1-201ENST00000275235 1202 ntTSL 2 BASIC7.56□□□□□ -1.22e-8■■□□□ 12.6
PRPF8Q6P2Q9 FAM204A-206ENST00000469758 1170 ntTSL 57.54□□□□□ -1.29e-6■■□□□ 12.6
PRPF8Q6P2Q9 XRCC1-203ENST00000594107 586 ntTSL 27.52□□□□□ -1.219e-6■■□□□ 12.6
PRPF8Q6P2Q9 CDYL-206ENST00000469671 732 ntTSL 37.5□□□□□ -1.219e-6■■□□□ 12.6
PRPF8Q6P2Q9 IPO5-225ENST00000493281 544 ntTSL 47.5□□□□□ -1.218e-12■■□□□ 12.6
PRPF8Q6P2Q9 IPO5-206ENST00000463157 493 ntTSL 47.48□□□□□ -1.218e-12■■□□□ 12.6
PRPF8Q6P2Q9 CACYBP-205ENST00000461977 574 ntTSL 27.46□□□□□ -1.215e-8■■□□□ 12.6
PRPF8Q6P2Q9 CDYL-204ENST00000440139 690 ntTSL 37.45□□□□□ -1.229e-6■■□□□ 12.6
PRPF8Q6P2Q9 ADAT1-206ENST00000566450 501 ntTSL 37.44□□□□□ -1.229e-6■■□□□ 12.6
PRPF8Q6P2Q9 IPO5-220ENST00000489058 522 ntTSL 47.44□□□□□ -1.228e-12■■□□□ 12.6
PRPF8Q6P2Q9 CDYL-201ENST00000328908 3419 ntTSL 1 (best) BASIC7.36□□□□□ -1.236e-6■■□□□ 12.6
PRPF8Q6P2Q9 ADAT1-205ENST00000566445 2768 ntTSL 57.36□□□□□ -1.239e-6■■□□□ 12.6
PRPF8Q6P2Q9 IPO5-217ENST00000481689 568 ntTSL 47.35□□□□□ -1.238e-12■■□□□ 12.6
PRPF8Q6P2Q9 BANP-213ENST00000466197 640 ntTSL 57.34□□□□□ -1.239e-6■■□□□ 12.6
PRPF8Q6P2Q9 MAP4K4-216ENST00000491743 646 ntTSL 47.34□□□□□ -1.234e-16■■□□□ 12.6
PRPF8Q6P2Q9 NREP-219ENST00000509979 771 ntTSL 4 BASIC7.31□□□□□ -1.243e-18■■□□□ 12.6
PRPF8Q6P2Q9 APOL1-205ENST00000422706 2901 ntAPPRIS ALT2 TSL 3 BASIC7.3□□□□□ -1.249e-7■■□□□ 12.6
PRPF8Q6P2Q9 ZNF248-208ENST00000611278 4204 ntTSL 1 (best) BASIC7.29□□□□□ -1.249e-6■■□□□ 12.6
PRPF8Q6P2Q9 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC7.23□□□□□ -1.259e-6■■□□□ 12.6
PRPF8Q6P2Q9 TXNDC9-206ENST00000438680 739 ntTSL 27.23□□□□□ -1.259e-6■■□□□ 12.6
PRPF8Q6P2Q9 GLS2-206ENST00000476991 491 ntTSL 47.17□□□□□ -1.269e-6■■□□□ 12.6
PRPF8Q6P2Q9 APOL1-206ENST00000426053 2808 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.279e-7■■□□□ 12.6
PRPF8Q6P2Q9 MKLN1-AS-206ENST00000454515 587 ntTSL 37.11□□□□□ -1.279e-6■■□□□ 12.6
PRPF8Q6P2Q9 DNAJC16-207ENST00000483270 2847 ntTSL 1 (best)7.08□□□□□ -1.289e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC7.07□□□□□ -1.289e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF714-201ENST00000425625 2562 ntTSL 5 BASIC7.05□□□□□ -1.289e-6■■□□□ 12.6
PRPF8Q6P2Q9 MKLN1-AS-203ENST00000444245 655 ntTSL 57.02□□□□□ -1.299e-6■■□□□ 12.6
PRPF8Q6P2Q9 TRIM16L-204ENST00000449552 3189 ntTSL 26.99□□□□□ -1.299e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF720-212ENST00000542684 481 ntTSL 36.94□□□□□ -1.39e-6■■□□□ 12.6
PRPF8Q6P2Q9 ST3GAL4-219ENST00000534457 987 ntTSL 1 (best) BASIC6.88□□□□□ -1.319e-6■■□□□ 12.6
PRPF8Q6P2Q9 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.314e-6■■□□□ 12.6
PRPF8Q6P2Q9 SPTAN1-215ENST00000628867 579 ntTSL 26.83□□□□□ -1.321e-10■■□□□ 12.6
PRPF8Q6P2Q9 HACE1-205ENST00000517424 1866 ntTSL 26.81□□□□□ -1.329e-6■■□□□ 12.6
PRPF8Q6P2Q9 ERO1A-210ENST00000557178 571 ntTSL 56.8□□□□□ -1.329e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF714-210ENST00000620627 2066 ntTSL 1 (best) BASIC6.8□□□□□ -1.329e-6■■□□□ 12.6
PRPF8Q6P2Q9 TRIM16L-214ENST00000581904 576 ntTSL 56.76□□□□□ -1.339e-6■■□□□ 12.6
PRPF8Q6P2Q9 MAP3K4-214ENST00000543421 581 ntTSL 46.74□□□□□ -1.333e-8■■□□□ 12.6
PRPF8Q6P2Q9 IPO5-205ENST00000460070 544 ntTSL 46.74□□□□□ -1.338e-12■■□□□ 12.6
PRPF8Q6P2Q9 IPO5-216ENST00000481455 555 ntTSL 46.74□□□□□ -1.338e-12■■□□□ 12.6
PRPF8Q6P2Q9 DNAJC21-206ENST00000514237 1038 ntTSL 1 (best)6.73□□□□□ -1.339e-6■■□□□ 12.6
PRPF8Q6P2Q9 MFSD8-215ENST00000641146 4780 nt6.72□□□□□ -1.339e-6■■□□□ 12.6
PRPF8Q6P2Q9 APOL1-201ENST00000319136 3000 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.339e-7■■□□□ 12.6
PRPF8Q6P2Q9 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC6.66□□□□□ -1.345e-8■■□□□ 12.6
PRPF8Q6P2Q9 KDM8-209ENST00000567735 798 ntTSL 36.58□□□□□ -1.369e-6■■□□□ 12.6
PRPF8Q6P2Q9 ATP6V0A1-215ENST00000587824 554 ntTSL 46.58□□□□□ -1.369e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.379e-6■■□□□ 12.6
PRPF8Q6P2Q9 ATIC-206ENST00000442048 442 ntTSL 36.51□□□□□ -1.379e-6■■□□□ 12.6
PRPF8Q6P2Q9 HACE1-209ENST00000518503 1608 ntTSL 56.48□□□□□ -1.379e-6■■□□□ 12.6
PRPF8Q6P2Q9 COL4A5-208ENST00000505728 537 ntTSL 36.47□□□□□ -1.373e-8■■□□□ 12.6
PRPF8Q6P2Q9 NPIPP1-203ENST00000547107 1071 ntBASIC6.43□□□□□ -1.389e-6■■□□□ 12.6
PRPF8Q6P2Q9 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC6.37□□□□□ -1.399e-6■■□□□ 12.6
PRPF8Q6P2Q9 ST3GAL4-206ENST00000524834 788 ntTSL 26.34□□□□□ -1.399e-6■■□□□ 12.6
PRPF8Q6P2Q9 NPIPP1-201ENST00000448011 575 ntTSL 46.31□□□□□ -1.49e-6■■□□□ 12.6
PRPF8Q6P2Q9 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.3□□□□□ -1.49e-6■■□□□ 12.6
PRPF8Q6P2Q9 MFSD8-226ENST00000641388 778 nt6.21□□□□□ -1.419e-6■■□□□ 12.6
PRPF8Q6P2Q9 TTF1-202ENST00000461970 581 ntTSL 26.18□□□□□ -1.429e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF720-205ENST00000529943 1214 ntTSL 26.14□□□□□ -1.439e-6■■□□□ 12.6
PRPF8Q6P2Q9 EBLN3P-207ENST00000631093 636 ntTSL 36.14□□□□□ -1.439e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.01□□□□□ -1.459e-6■■□□□ 12.6
PRPF8Q6P2Q9 IPO5-221ENST00000490369 542 ntTSL 45.93□□□□□ -1.468e-12■■□□□ 12.6
PRPF8Q6P2Q9 ZNF720-209ENST00000534277 5994 ntTSL 1 (best)5.84□□□□□ -1.479e-6■■□□□ 12.6
PRPF8Q6P2Q9 SETD2-206ENST00000479832 794 ntTSL 35.82□□□□□ -1.487e-6■■□□□ 12.6
PRPF8Q6P2Q9 ARHGAP26-217ENST00000475287 643 ntTSL 55.82□□□□□ -1.489e-6■■□□□ 12.6
PRPF8Q6P2Q9 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.8□□□□□ -1.483e-18■■□□□ 12.6
PRPF8Q6P2Q9 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.8□□□□□ -1.483e-18■■□□□ 12.6
PRPF8Q6P2Q9 RMND5A-204ENST00000472843 592 ntTSL 25.77□□□□□ -1.499e-6■■□□□ 12.6
PRPF8Q6P2Q9 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.493e-7■■□□□ 12.6
PRPF8Q6P2Q9 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.71□□□□□ -1.59e-6■■□□□ 12.6
PRPF8Q6P2Q9 KDM8-208ENST00000567366 583 ntTSL 35.69□□□□□ -1.59e-6■■□□□ 12.6
PRPF8Q6P2Q9 EPB41L1-211ENST00000432603 864 ntTSL 35.6□□□□□ -1.513e-8■■□□□ 12.6
PRPF8Q6P2Q9 MFSD8-229ENST00000641413 854 nt5.54□□□□□ -1.529e-6■■□□□ 12.6
PRPF8Q6P2Q9 TBC1D5-214ENST00000443386 561 ntTSL 45.46□□□□□ -1.549e-6■■□□□ 12.6
PRPF8Q6P2Q9 TBC1D5-217ENST00000444756 545 ntTSL 45.46□□□□□ -1.549e-6■■□□□ 12.6
PRPF8Q6P2Q9 KTN1-213ENST00000554306 476 ntTSL 35.39□□□□□ -1.559e-6■■□□□ 12.6
PRPF8Q6P2Q9 MIR1204-201ENST00000408388 67 ntBASIC5.35□□□□□ -1.551e-10■■□□□ 12.6
Retrieved 100 of 73,762 protein–RNA pairs in 724.5 ms