Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
UBE4BO95155 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
UBE4BO95155 OR13H1-201ENST00000338616 927 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
UBE4BO95155 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
UBE4BO95155 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
UBE4BO95155 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
UBE4BO95155 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC8.73□□□□□ -1.01
UBE4BO95155 RNU1-11P-201ENST00000383975 164 ntBASIC8.73□□□□□ -1.01
UBE4BO95155 RN7SKP261-201ENST00000410948 278 ntBASIC8.73□□□□□ -1.01
UBE4BO95155 CTBP2P1-201ENST00000431853 245 ntBASIC8.73□□□□□ -1.01
UBE4BO95155 AC092447.7-202ENST00000443198 580 ntTSL 2 BASIC8.73□□□□□ -1.01
UBE4BO95155 LINC01888-202ENST00000457602 574 ntTSL 2 BASIC8.73□□□□□ -1.01
UBE4BO95155 AC093297.2-201ENST00000503452 738 ntTSL 2 BASIC8.73□□□□□ -1.01
UBE4BO95155 CC2D2A-205ENST00000503658 605 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
UBE4BO95155 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC8.73□□□□□ -1.01
UBE4BO95155 SCARNA20.3-201ENST00000516913 131 ntBASIC8.73□□□□□ -1.01
UBE4BO95155 AC025419.1-202ENST00000535315 744 ntTSL 3 BASIC8.73□□□□□ -1.01
UBE4BO95155 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
UBE4BO95155 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC8.73□□□□□ -1.01
UBE4BO95155 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC8.73□□□□□ -1.01
UBE4BO95155 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC8.73□□□□□ -1.01
UBE4BO95155 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC8.73□□□□□ -1.01
UBE4BO95155 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC8.73□□□□□ -1.01
UBE4BO95155 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
UBE4BO95155 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC8.73□□□□□ -1.01
UBE4BO95155 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC8.73□□□□□ -1.01
UBE4BO95155 ABCA17P-204ENST00000494925 3478 ntBASIC8.73□□□□□ -1.01
UBE4BO95155 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
UBE4BO95155 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC8.73□□□□□ -1.01
UBE4BO95155 AC106800.1-201ENST00000501221 1362 ntBASIC8.73□□□□□ -1.01
UBE4BO95155 LINC00934-202ENST00000630357 2291 ntTSL 2 BASIC8.73□□□□□ -1.01
UBE4BO95155 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC8.73□□□□□ -1.01
UBE4BO95155 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC8.73□□□□□ -1.01
UBE4BO95155 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC8.72□□□□□ -1.01
UBE4BO95155 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
UBE4BO95155 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
UBE4BO95155 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
UBE4BO95155 LINC00294-201ENST00000631190 3306 ntBASIC8.72□□□□□ -1.01
UBE4BO95155 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
UBE4BO95155 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
UBE4BO95155 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC8.72□□□□□ -1.01
UBE4BO95155 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
UBE4BO95155 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
UBE4BO95155 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC8.72□□□□□ -1.01
UBE4BO95155 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC8.72□□□□□ -1.01
UBE4BO95155 LRRC37A11P-202ENST00000579258 3717 ntBASIC8.72□□□□□ -1.01
UBE4BO95155 OR1J4-201ENST00000340750 942 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
UBE4BO95155 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
UBE4BO95155 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC8.72□□□□□ -1.01
UBE4BO95155 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC8.72□□□□□ -1.01
UBE4BO95155 SATB1-AS1-202ENST00000425799 611 ntTSL 5 BASIC8.72□□□□□ -1.01
UBE4BO95155 AC016734.1-201ENST00000436998 654 ntBASIC8.72□□□□□ -1.01
UBE4BO95155 RN7SL272P-201ENST00000487762 289 ntBASIC8.72□□□□□ -1.01
UBE4BO95155 RPL5P3-201ENST00000493817 889 ntBASIC8.72□□□□□ -1.01
UBE4BO95155 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC8.72□□□□□ -1.01
UBE4BO95155 AC027607.1-201ENST00000503034 534 ntTSL 3 BASIC8.72□□□□□ -1.01
UBE4BO95155 TRIM6-211ENST00000515022 1060 ntTSL 2 BASIC8.72□□□□□ -1.01
UBE4BO95155 IGKV3D-31-201ENST00000519131 281 ntBASIC8.72□□□□□ -1.01
UBE4BO95155 C11orf65-203ENST00000525729 1263 ntTSL 2 BASIC8.72□□□□□ -1.01
UBE4BO95155 LACRT-203ENST00000547511 504 ntAPPRIS ALT2 TSL 3 BASIC8.72□□□□□ -1.01
UBE4BO95155 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC8.72□□□□□ -1.01
UBE4BO95155 AC005230.1-201ENST00000555418 285 ntBASIC8.72□□□□□ -1.01
UBE4BO95155 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC8.72□□□□□ -1.01
UBE4BO95155 AL357093.2-202ENST00000556942 498 ntTSL 2 BASIC8.72□□□□□ -1.01
UBE4BO95155 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC8.72□□□□□ -1.01
UBE4BO95155 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC8.72□□□□□ -1.01
UBE4BO95155 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC8.72□□□□□ -1.01
UBE4BO95155 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC8.72□□□□□ -1.01
UBE4BO95155 LINC01358-208ENST00000634569 1030 ntTSL 5 BASIC8.72□□□□□ -1.01
UBE4BO95155 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
UBE4BO95155 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
UBE4BO95155 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
UBE4BO95155 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
UBE4BO95155 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
UBE4BO95155 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.71□□□□□ -1.01
UBE4BO95155 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
UBE4BO95155 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC8.71□□□□□ -1.01
UBE4BO95155 AC117382.2-201ENST00000564748 3151 ntBASIC8.71□□□□□ -1.01
UBE4BO95155 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC8.71□□□□□ -1.01
UBE4BO95155 AC073324.1-201ENST00000425993 1435 ntBASIC8.71□□□□□ -1.01
UBE4BO95155 ZNF300P1-201ENST00000356555 1822 ntBASIC8.71□□□□□ -1.01
UBE4BO95155 AC002090.1-201ENST00000625000 2138 ntBASIC8.71□□□□□ -1.01
UBE4BO95155 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC8.71□□□□□ -1.01
UBE4BO95155 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
UBE4BO95155 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
UBE4BO95155 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC8.71□□□□□ -1.02
UBE4BO95155 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
UBE4BO95155 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
UBE4BO95155 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
UBE4BO95155 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
UBE4BO95155 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
UBE4BO95155 OR2AK2-201ENST00000366480 1154 ntAPPRIS ALT2 BASIC8.71□□□□□ -1.02
UBE4BO95155 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.02
UBE4BO95155 PPIH-203ENST00000372550 665 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
UBE4BO95155 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
UBE4BO95155 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC8.71□□□□□ -1.02
UBE4BO95155 H2AFZP3-201ENST00000394213 387 ntBASIC8.71□□□□□ -1.02
UBE4BO95155 PAICSP1-201ENST00000425324 1217 ntBASIC8.71□□□□□ -1.02
UBE4BO95155 ATP13A4-AS1-201ENST00000426459 795 ntTSL 3 BASIC8.71□□□□□ -1.02
UBE4BO95155 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms