Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC024022.1-203ENST00000515392 478 ntTSL 3 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 ATP6V1G1P2-201ENST00000522436 346 ntBASIC7.47□□□□□ -1.21
SNX18Q96RF0 PRB4-203ENST00000535904 796 ntAPPRIS P3 TSL 2 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 AC087286.4-201ENST00000558757 746 ntTSL 3 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 TP53TG3HP-201ENST00000563487 346 ntBASIC7.47□□□□□ -1.21
SNX18Q96RF0 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 OR4C45-201ENST00000568934 921 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 AC007221.1-201ENST00000570038 796 ntTSL 5 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 AC005154.1-216ENST00000582145 1101 ntTSL 5 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 ZNF793-AS1-205ENST00000589025 560 ntTSL 2 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 MKNK2-211ENST00000591142 875 ntTSL 2 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 AC015911.8-201ENST00000592517 560 ntBASIC7.47□□□□□ -1.21
SNX18Q96RF0 ZNF677-208ENST00000599012 796 ntTSL 3 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 ZSCAN30-210ENST00000601405 510 ntTSL 5 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 AC079414.3-201ENST00000612986 1090 ntBASIC7.47□□□□□ -1.21
SNX18Q96RF0 AC024559.2-202ENST00000615240 529 ntTSL 5 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 AC009159.3-201ENST00000615570 804 ntBASIC7.47□□□□□ -1.21
SNX18Q96RF0 CTXN3-204ENST00000620385 1208 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 AC133485.6-201ENST00000624045 688 ntBASIC7.47□□□□□ -1.21
SNX18Q96RF0 OR5AR1-201ENST00000624596 1026 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 AL583852.1-201ENST00000635018 572 ntTSL 4 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 AL158175.1-203ENST00000635654 1281 ntTSL 5 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 LINC02291-201ENST00000355909 1670 ntTSL 2 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 NGDN-201ENST00000397154 2204 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 RPS2P45-201ENST00000469997 2057 ntBASIC7.47□□□□□ -1.21
SNX18Q96RF0 LINC00934-202ENST00000630357 2291 ntTSL 2 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 AC073072.1-201ENST00000325042 1364 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SNX18Q96RF0 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SNX18Q96RF0 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC7.46□□□□□ -1.21
SNX18Q96RF0 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SNX18Q96RF0 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.21
SNX18Q96RF0 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
SNX18Q96RF0 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC7.46□□□□□ -1.21
SNX18Q96RF0 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SNX18Q96RF0 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SNX18Q96RF0 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.46□□□□□ -1.21
SNX18Q96RF0 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
SNX18Q96RF0 LCLAT1-201ENST00000309052 5060 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SNX18Q96RF0 COL6A4P1-202ENST00000487147 4317 ntBASIC7.46□□□□□ -1.22
SNX18Q96RF0 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SNX18Q96RF0 MIR135B-201ENST00000362189 97 ntBASIC7.46□□□□□ -1.22
SNX18Q96RF0 ENSA-209ENST00000369016 923 ntTSL 5 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 RPL5P8-201ENST00000396820 815 ntBASIC7.46□□□□□ -1.22
SNX18Q96RF0 AL355375.1-201ENST00000405686 392 ntBASIC7.46□□□□□ -1.22
SNX18Q96RF0 AL136380.2-201ENST00000411837 492 ntBASIC7.46□□□□□ -1.22
SNX18Q96RF0 SYNE1-AS1-201ENST00000412161 553 ntTSL 2 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 AC104455.1-201ENST00000417340 736 ntBASIC7.46□□□□□ -1.22
SNX18Q96RF0 AC074033.1-201ENST00000418623 410 ntBASIC7.46□□□□□ -1.22
SNX18Q96RF0 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC7.46□□□□□ -1.22
SNX18Q96RF0 KRT223P-201ENST00000422957 519 ntTSL 2 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 LINC01363-201ENST00000426709 971 ntTSL 5 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 AC018641.1-201ENST00000435950 796 ntBASIC7.46□□□□□ -1.22
SNX18Q96RF0 LINC01185-201ENST00000439412 554 ntTSL 4 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 LINC02093-201ENST00000440522 485 ntTSL 5 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 PGM5P4-AS1-204ENST00000450636 537 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SNX18Q96RF0 KLF7P1-201ENST00000490941 1048 ntBASIC7.46□□□□□ -1.22
SNX18Q96RF0 AC096751.2-201ENST00000507483 792 ntTSL 3 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 AC073648.1-201ENST00000508957 930 ntBASIC7.46□□□□□ -1.22
SNX18Q96RF0 AC006499.1-201ENST00000511870 850 ntBASIC7.46□□□□□ -1.22
SNX18Q96RF0 OR7E85P-201ENST00000512164 985 ntBASIC7.46□□□□□ -1.22
SNX18Q96RF0 AC112192.1-201ENST00000515086 553 ntTSL 4 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 IGHVII-78-1-201ENST00000521105 269 ntBASIC7.46□□□□□ -1.22
SNX18Q96RF0 HNRNPA1P38-201ENST00000523612 957 ntBASIC7.46□□□□□ -1.22
SNX18Q96RF0 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 DDIT3-205ENST00000552740 951 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SNX18Q96RF0 AL392023.2-201ENST00000554687 785 ntTSL 4 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 AC090607.2-201ENST00000560331 695 ntBASIC7.46□□□□□ -1.22
SNX18Q96RF0 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 AC009154.1-201ENST00000565822 508 ntTSL 3 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 RN7SL118P-201ENST00000580570 302 ntBASIC7.46□□□□□ -1.22
SNX18Q96RF0 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 AL590705.1-201ENST00000607322 484 ntTSL 4 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 AC104237.3-201ENST00000611809 427 ntBASIC7.46□□□□□ -1.22
SNX18Q96RF0 CARMN-212ENST00000614896 536 ntTSL 5 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 AL022318.4-202ENST00000622217 591 ntTSL 5 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 AC027348.2-201ENST00000624375 642 ntBASIC7.46□□□□□ -1.22
SNX18Q96RF0 ANKMY2-205ENST00000627859 210 ntTSL 5 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 FLII-230ENST00000628188 156 ntTSL 5 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
SNX18Q96RF0 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 AC024896.1-201ENST00000500632 2549 ntTSL 5 BASIC7.46□□□□□ -1.22
SNX18Q96RF0 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SNX18Q96RF0 F11-AS1-202ENST00000508110 1512 ntTSL 5 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms