Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLCA3PQ9Y6N3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLCA3PQ9Y6N3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLCA3PQ9Y6N3 AL391422.3-201ENST00000603791 2761 ntBASIC19.07■□□□□ 0.64
CLCA3PQ9Y6N3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.07■□□□□ 0.64
CLCA3PQ9Y6N3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCA3PQ9Y6N3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CLCA3PQ9Y6N3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CLCA3PQ9Y6N3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.07■□□□□ 0.64
CLCA3PQ9Y6N3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.07■□□□□ 0.64
CLCA3PQ9Y6N3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.07■□□□□ 0.64
CLCA3PQ9Y6N3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.07■□□□□ 0.64
CLCA3PQ9Y6N3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLCA3PQ9Y6N3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.07■□□□□ 0.64
CLCA3PQ9Y6N3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCA3PQ9Y6N3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.07■□□□□ 0.64
CLCA3PQ9Y6N3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCA3PQ9Y6N3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CLCA3PQ9Y6N3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 KRT17P1-201ENST00000399211 1546 ntBASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 AC069152.1-201ENST00000438030 544 ntBASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 AL356652.1-201ENST00000615962 565 ntBASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLCA3PQ9Y6N3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 AC073210.2-201ENST00000430369 194 ntBASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 AC105020.6-201ENST00000621523 1217 ntBASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLCA3PQ9Y6N3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.04■□□□□ 0.64
CLCA3PQ9Y6N3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCA3PQ9Y6N3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLCA3PQ9Y6N3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLCA3PQ9Y6N3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCA3PQ9Y6N3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCA3PQ9Y6N3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CLCA3PQ9Y6N3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
CLCA3PQ9Y6N3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CLCA3PQ9Y6N3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CLCA3PQ9Y6N3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.04■□□□□ 0.64
CLCA3PQ9Y6N3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCA3PQ9Y6N3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.04■□□□□ 0.64
CLCA3PQ9Y6N3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCA3PQ9Y6N3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.04■□□□□ 0.64
CLCA3PQ9Y6N3 MIR2861-201ENST00000636310 90 ntBASIC19.04■□□□□ 0.64
CLCA3PQ9Y6N3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CLCA3PQ9Y6N3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCA3PQ9Y6N3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.04■□□□□ 0.64
CLCA3PQ9Y6N3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLCA3PQ9Y6N3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CLCA3PQ9Y6N3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLCA3PQ9Y6N3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCA3PQ9Y6N3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
CLCA3PQ9Y6N3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.03■□□□□ 0.64
CLCA3PQ9Y6N3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.03■□□□□ 0.64
CLCA3PQ9Y6N3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCA3PQ9Y6N3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCA3PQ9Y6N3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCA3PQ9Y6N3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCA3PQ9Y6N3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
CLCA3PQ9Y6N3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCA3PQ9Y6N3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLCA3PQ9Y6N3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCA3PQ9Y6N3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLCA3PQ9Y6N3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms