Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CDC42BPBQ9Y5S2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CDC42BPBQ9Y5S2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC30.84■■■□□ 2.53
CDC42BPBQ9Y5S2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC30.84■■■□□ 2.53
CDC42BPBQ9Y5S2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC30.84■■■□□ 2.53
CDC42BPBQ9Y5S2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC30.84■■■□□ 2.53
CDC42BPBQ9Y5S2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CDC42BPBQ9Y5S2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC30.84■■■□□ 2.53
CDC42BPBQ9Y5S2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC30.84■■■□□ 2.53
CDC42BPBQ9Y5S2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
CDC42BPBQ9Y5S2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC30.83■■■□□ 2.53
CDC42BPBQ9Y5S2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC30.83■■■□□ 2.53
CDC42BPBQ9Y5S2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CDC42BPBQ9Y5S2 KRT18P57-201ENST00000443599 1254 ntBASIC30.83■■■□□ 2.53
CDC42BPBQ9Y5S2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC30.83■■■□□ 2.53
CDC42BPBQ9Y5S2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC30.83■■■□□ 2.53
CDC42BPBQ9Y5S2 AC116562.2-201ENST00000507042 360 ntBASIC30.83■■■□□ 2.53
CDC42BPBQ9Y5S2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC30.83■■■□□ 2.53
CDC42BPBQ9Y5S2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
CDC42BPBQ9Y5S2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC30.83■■■□□ 2.53
CDC42BPBQ9Y5S2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CDC42BPBQ9Y5S2 AC027702.1-201ENST00000563810 1770 ntBASIC30.83■■■□□ 2.53
CDC42BPBQ9Y5S2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC30.82■■■□□ 2.53
CDC42BPBQ9Y5S2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
CDC42BPBQ9Y5S2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
CDC42BPBQ9Y5S2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC30.82■■■□□ 2.52
CDC42BPBQ9Y5S2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CDC42BPBQ9Y5S2 AC005521.1-201ENST00000393351 872 ntBASIC30.82■■■□□ 2.52
CDC42BPBQ9Y5S2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC30.82■■■□□ 2.52
CDC42BPBQ9Y5S2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC30.82■■■□□ 2.52
CDC42BPBQ9Y5S2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC30.82■■■□□ 2.52
CDC42BPBQ9Y5S2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
CDC42BPBQ9Y5S2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CDC42BPBQ9Y5S2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
CDC42BPBQ9Y5S2 ECEL1P1-201ENST00000373592 1742 ntBASIC30.82■■■□□ 2.52
CDC42BPBQ9Y5S2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CDC42BPBQ9Y5S2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CDC42BPBQ9Y5S2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CDC42BPBQ9Y5S2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC30.82■■■□□ 2.52
CDC42BPBQ9Y5S2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CDC42BPBQ9Y5S2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
CDC42BPBQ9Y5S2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC30.81■■■□□ 2.52
CDC42BPBQ9Y5S2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CDC42BPBQ9Y5S2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CDC42BPBQ9Y5S2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CDC42BPBQ9Y5S2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC30.81■■■□□ 2.52
CDC42BPBQ9Y5S2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC30.81■■■□□ 2.52
CDC42BPBQ9Y5S2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CDC42BPBQ9Y5S2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CDC42BPBQ9Y5S2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC30.81■■■□□ 2.52
CDC42BPBQ9Y5S2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC30.81■■■□□ 2.52
CDC42BPBQ9Y5S2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CDC42BPBQ9Y5S2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC30.8■■■□□ 2.52
CDC42BPBQ9Y5S2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CDC42BPBQ9Y5S2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
CDC42BPBQ9Y5S2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CDC42BPBQ9Y5S2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC30.8■■■□□ 2.52
CDC42BPBQ9Y5S2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CDC42BPBQ9Y5S2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC30.8■■■□□ 2.52
CDC42BPBQ9Y5S2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
CDC42BPBQ9Y5S2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
CDC42BPBQ9Y5S2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC30.8■■■□□ 2.52
CDC42BPBQ9Y5S2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CDC42BPBQ9Y5S2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC30.8■■■□□ 2.52
CDC42BPBQ9Y5S2 CYP2D8P-201ENST00000433633 1490 ntBASIC30.8■■■□□ 2.52
CDC42BPBQ9Y5S2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC30.79■■■□□ 2.52
CDC42BPBQ9Y5S2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CDC42BPBQ9Y5S2 TERF1P1-201ENST00000311003 1181 ntBASIC30.79■■■□□ 2.52
CDC42BPBQ9Y5S2 AL049597.2-201ENST00000565575 961 ntBASIC30.79■■■□□ 2.52
CDC42BPBQ9Y5S2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC30.79■■■□□ 2.52
CDC42BPBQ9Y5S2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CDC42BPBQ9Y5S2 KRT16P1-201ENST00000399124 1418 ntBASIC30.79■■■□□ 2.52
CDC42BPBQ9Y5S2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC30.79■■■□□ 2.52
CDC42BPBQ9Y5S2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
CDC42BPBQ9Y5S2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CDC42BPBQ9Y5S2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CDC42BPBQ9Y5S2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CDC42BPBQ9Y5S2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC30.78■■■□□ 2.52
CDC42BPBQ9Y5S2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CDC42BPBQ9Y5S2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CDC42BPBQ9Y5S2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CDC42BPBQ9Y5S2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
CDC42BPBQ9Y5S2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
CDC42BPBQ9Y5S2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CDC42BPBQ9Y5S2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
CDC42BPBQ9Y5S2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC30.77■■■□□ 2.52
CDC42BPBQ9Y5S2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC30.77■■■□□ 2.52
CDC42BPBQ9Y5S2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CDC42BPBQ9Y5S2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
CDC42BPBQ9Y5S2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC30.77■■■□□ 2.52
CDC42BPBQ9Y5S2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC30.77■■■□□ 2.52
CDC42BPBQ9Y5S2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
CDC42BPBQ9Y5S2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
CDC42BPBQ9Y5S2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC30.76■■■□□ 2.52
CDC42BPBQ9Y5S2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC30.76■■■□□ 2.52
CDC42BPBQ9Y5S2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC30.76■■■□□ 2.52
CDC42BPBQ9Y5S2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC30.76■■■□□ 2.52
CDC42BPBQ9Y5S2 AC010947.1-201ENST00000623454 693 ntBASIC30.76■■■□□ 2.52
CDC42BPBQ9Y5S2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC30.76■■■□□ 2.52
CDC42BPBQ9Y5S2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms