Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.86■□□□□ 0.61
CLDN16Q9Y5I7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN16Q9Y5I7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.86■□□□□ 0.61
CLDN16Q9Y5I7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN16Q9Y5I7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN16Q9Y5I7 GABARAPL3-202ENST00000624044 1851 ntBASIC18.86■□□□□ 0.61
CLDN16Q9Y5I7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN16Q9Y5I7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN16Q9Y5I7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.85■□□□□ 0.61
CLDN16Q9Y5I7 AC092368.3-202ENST00000574180 1591 ntBASIC18.85■□□□□ 0.61
CLDN16Q9Y5I7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CLDN16Q9Y5I7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN16Q9Y5I7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN16Q9Y5I7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN16Q9Y5I7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN16Q9Y5I7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN16Q9Y5I7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.85■□□□□ 0.61
CLDN16Q9Y5I7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.85■□□□□ 0.61
CLDN16Q9Y5I7 AC023632.3-201ENST00000521633 145 ntBASIC18.85■□□□□ 0.61
CLDN16Q9Y5I7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.85■□□□□ 0.61
CLDN16Q9Y5I7 AC008403.3-201ENST00000598924 454 ntBASIC18.85■□□□□ 0.61
CLDN16Q9Y5I7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN16Q9Y5I7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN16Q9Y5I7 AL162377.1-201ENST00000618844 1793 ntBASIC18.85■□□□□ 0.61
CLDN16Q9Y5I7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLDN16Q9Y5I7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN16Q9Y5I7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN16Q9Y5I7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 AC005829.2-201ENST00000571422 1056 ntBASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN16Q9Y5I7 SMG8-203ENST00000578922 2178 ntBASIC18.83■□□□□ 0.61
CLDN16Q9Y5I7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN16Q9Y5I7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.83■□□□□ 0.61
CLDN16Q9Y5I7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.83■□□□□ 0.61
CLDN16Q9Y5I7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CLDN16Q9Y5I7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN16Q9Y5I7 AL512408.1-201ENST00000569378 2000 ntBASIC18.83■□□□□ 0.61
CLDN16Q9Y5I7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN16Q9Y5I7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.83■□□□□ 0.61
CLDN16Q9Y5I7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN16Q9Y5I7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN16Q9Y5I7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CLDN16Q9Y5I7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN16Q9Y5I7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN16Q9Y5I7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN16Q9Y5I7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.83■□□□□ 0.6
CLDN16Q9Y5I7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN16Q9Y5I7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CLDN16Q9Y5I7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN16Q9Y5I7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN16Q9Y5I7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN16Q9Y5I7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CLDN16Q9Y5I7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN16Q9Y5I7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms