Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 AC097658.1-201ENST00000475555 843 ntBASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 AC091874.3-201ENST00000512672 1195 ntBASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 AL356652.1-201ENST00000615962 565 ntBASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 AC105020.6-201ENST00000621523 1217 ntBASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPH3AQ9Y2J0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 AC073210.2-201ENST00000430369 194 ntBASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RPH3AQ9Y2J0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 MIR2861-201ENST00000636310 90 ntBASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RPH3AQ9Y2J0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RPH3AQ9Y2J0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
RPH3AQ9Y2J0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RPH3AQ9Y2J0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPH3AQ9Y2J0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.45■□□□□ 0.54
RPH3AQ9Y2J0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPH3AQ9Y2J0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPH3AQ9Y2J0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
RPH3AQ9Y2J0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPH3AQ9Y2J0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPH3AQ9Y2J0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.45■□□□□ 0.54
RPH3AQ9Y2J0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RPH3AQ9Y2J0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPH3AQ9Y2J0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
RPH3AQ9Y2J0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPH3AQ9Y2J0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPH3AQ9Y2J0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPH3AQ9Y2J0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPH3AQ9Y2J0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPH3AQ9Y2J0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPH3AQ9Y2J0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms