Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 AC010327.4-202ENST00000591484 748 ntBASIC8.41□□□□□ -1.06
MACF1Q9UPN3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 TPSP2-201ENST00000561760 610 ntBASIC8.41□□□□□ -1.06
MACF1Q9UPN3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC8.41□□□□□ -1.06
MACF1Q9UPN3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC8.4□□□□□ -1.06
MACF1Q9UPN3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
MACF1Q9UPN3 COX20P2-201ENST00000452636 358 ntBASIC8.4□□□□□ -1.06
MACF1Q9UPN3 AC134684.3-201ENST00000641758 218 ntBASIC8.4□□□□□ -1.06
MACF1Q9UPN3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC8.4□□□□□ -1.06
MACF1Q9UPN3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC8.4□□□□□ -1.06
MACF1Q9UPN3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
MACF1Q9UPN3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC8.4□□□□□ -1.06
MACF1Q9UPN3 AC098831.1-202ENST00000438821 336 ntBASIC8.4□□□□□ -1.06
MACF1Q9UPN3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC8.4□□□□□ -1.06
MACF1Q9UPN3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
MACF1Q9UPN3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
MACF1Q9UPN3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
MACF1Q9UPN3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
MACF1Q9UPN3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
MACF1Q9UPN3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC8.4□□□□□ -1.06
MACF1Q9UPN3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
MACF1Q9UPN3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC8.4□□□□□ -1.06
MACF1Q9UPN3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
MACF1Q9UPN3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
MACF1Q9UPN3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC8.4□□□□□ -1.06
MACF1Q9UPN3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC8.4□□□□□ -1.06
MACF1Q9UPN3 AC007274.1-201ENST00000439805 662 ntBASIC8.4□□□□□ -1.06
MACF1Q9UPN3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC8.4□□□□□ -1.06
MACF1Q9UPN3 SART3-203ENST00000546611 1184 ntBASIC8.4□□□□□ -1.06
MACF1Q9UPN3 AC092364.2-202ENST00000597012 1073 ntBASIC8.4□□□□□ -1.06
MACF1Q9UPN3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.07
MACF1Q9UPN3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
MACF1Q9UPN3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC8.4□□□□□ -1.07
MACF1Q9UPN3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
MACF1Q9UPN3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC8.4□□□□□ -1.07
MACF1Q9UPN3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
MACF1Q9UPN3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC8.4□□□□□ -1.07
MACF1Q9UPN3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC8.4□□□□□ -1.07
MACF1Q9UPN3 AP001160.2-201ENST00000596071 487 ntBASIC8.4□□□□□ -1.07
MACF1Q9UPN3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
MACF1Q9UPN3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC8.4□□□□□ -1.07
MACF1Q9UPN3 LINC01960-201ENST00000563759 1884 ntBASIC8.4□□□□□ -1.07
MACF1Q9UPN3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
MACF1Q9UPN3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
MACF1Q9UPN3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
MACF1Q9UPN3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
MACF1Q9UPN3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC8.4□□□□□ -1.07
MACF1Q9UPN3 KRT18P38-201ENST00000449496 1282 ntBASIC8.4□□□□□ -1.07
MACF1Q9UPN3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC8.4□□□□□ -1.07
MACF1Q9UPN3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC8.4□□□□□ -1.07
MACF1Q9UPN3 ABBA01031674.1-201ENST00000635145 728 ntBASIC8.4□□□□□ -1.07
MACF1Q9UPN3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 GK-202ENST00000378941 458 ntTSL 3 BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 AC079781.3-201ENST00000449110 356 ntBASIC8.39□□□□□ -1.07
MACF1Q9UPN3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 SPDYE15P-201ENST00000424157 909 ntBASIC8.39□□□□□ -1.07
MACF1Q9UPN3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 B3GAT3P1-201ENST00000471720 806 ntBASIC8.39□□□□□ -1.07
MACF1Q9UPN3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 TERC-201ENST00000602385 541 ntBASIC8.39□□□□□ -1.07
MACF1Q9UPN3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 RPSAP43-201ENST00000402237 625 ntBASIC8.39□□□□□ -1.07
MACF1Q9UPN3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 PRSS44-201ENST00000515154 1146 ntBASIC8.39□□□□□ -1.07
MACF1Q9UPN3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
MACF1Q9UPN3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
MACF1Q9UPN3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms