Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGB4Q9UN71 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGB4Q9UN71 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PCDHGB4Q9UN71 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGB4Q9UN71 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGB4Q9UN71 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGB4Q9UN71 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGB4Q9UN71 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGB4Q9UN71 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGB4Q9UN71 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGB4Q9UN71 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGB4Q9UN71 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGB4Q9UN71 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGB4Q9UN71 AC138907.5-202ENST00000569484 235 ntBASIC19.52■□□□□ 0.72
PCDHGB4Q9UN71 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHGB4Q9UN71 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PCDHGB4Q9UN71 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGB4Q9UN71 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGB4Q9UN71 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB4Q9UN71 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB4Q9UN71 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB4Q9UN71 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHGB4Q9UN71 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB4Q9UN71 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHGB4Q9UN71 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB4Q9UN71 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB4Q9UN71 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PCDHGB4Q9UN71 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB4Q9UN71 AC027612.3-201ENST00000413684 1047 ntBASIC19.51■□□□□ 0.71
PCDHGB4Q9UN71 AC245052.3-201ENST00000450182 901 ntBASIC19.51■□□□□ 0.71
PCDHGB4Q9UN71 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.51■□□□□ 0.71
PCDHGB4Q9UN71 LINC02228-203ENST00000641970 1355 ntBASIC19.51■□□□□ 0.71
PCDHGB4Q9UN71 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB4Q9UN71 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB4Q9UN71 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB4Q9UN71 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB4Q9UN71 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHGB4Q9UN71 KRT16P2-201ENST00000414673 1423 ntBASIC19.51■□□□□ 0.71
PCDHGB4Q9UN71 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 MIR638-201ENST00000385237 100 ntBASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PCDHGB4Q9UN71 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB4Q9UN71 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDHGB4Q9UN71 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB4Q9UN71 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHGB4Q9UN71 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB4Q9UN71 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGB4Q9UN71 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGB4Q9UN71 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHGB4Q9UN71 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB4Q9UN71 AL512408.1-201ENST00000569378 2000 ntBASIC19.49■□□□□ 0.71
PCDHGB4Q9UN71 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDHGB4Q9UN71 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB4Q9UN71 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB4Q9UN71 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB4Q9UN71 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB4Q9UN71 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB4Q9UN71 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGB4Q9UN71 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB4Q9UN71 AC026471.1-201ENST00000564629 3026 ntBASIC19.48■□□□□ 0.71
PCDHGB4Q9UN71 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB4Q9UN71 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB4Q9UN71 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGB4Q9UN71 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGB4Q9UN71 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGB4Q9UN71 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGB4Q9UN71 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB4Q9UN71 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms