Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBP1Q9NZI7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.6■□□□□ 0.89
UBP1Q9NZI7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBP1Q9NZI7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBP1Q9NZI7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBP1Q9NZI7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.6■□□□□ 0.89
UBP1Q9NZI7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBP1Q9NZI7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBP1Q9NZI7 SLC25A24-204ENST00000569674 2357 ntBASIC20.6■□□□□ 0.89
UBP1Q9NZI7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBP1Q9NZI7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.6■□□□□ 0.89
UBP1Q9NZI7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.6■□□□□ 0.89
UBP1Q9NZI7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBP1Q9NZI7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBP1Q9NZI7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.6■□□□□ 0.89
UBP1Q9NZI7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
UBP1Q9NZI7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
UBP1Q9NZI7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBP1Q9NZI7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBP1Q9NZI7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.59■□□□□ 0.89
UBP1Q9NZI7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.59■□□□□ 0.89
UBP1Q9NZI7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBP1Q9NZI7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBP1Q9NZI7 MIR663A-201ENST00000385250 93 ntBASIC20.59■□□□□ 0.89
UBP1Q9NZI7 MCRIP2P1-201ENST00000394346 511 ntBASIC20.59■□□□□ 0.89
UBP1Q9NZI7 CROCCP5-201ENST00000436658 830 ntBASIC20.59■□□□□ 0.89
UBP1Q9NZI7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBP1Q9NZI7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
UBP1Q9NZI7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBP1Q9NZI7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBP1Q9NZI7 AL162377.1-201ENST00000618844 1793 ntBASIC20.59■□□□□ 0.89
UBP1Q9NZI7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.59■□□□□ 0.89
UBP1Q9NZI7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.59■□□□□ 0.89
UBP1Q9NZI7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBP1Q9NZI7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBP1Q9NZI7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBP1Q9NZI7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.58■□□□□ 0.89
UBP1Q9NZI7 DPP3P2-201ENST00000416030 1696 ntBASIC20.58■□□□□ 0.89
UBP1Q9NZI7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBP1Q9NZI7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBP1Q9NZI7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBP1Q9NZI7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.58■□□□□ 0.89
UBP1Q9NZI7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBP1Q9NZI7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.58■□□□□ 0.89
UBP1Q9NZI7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.58■□□□□ 0.89
UBP1Q9NZI7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.58■□□□□ 0.89
UBP1Q9NZI7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBP1Q9NZI7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.58■□□□□ 0.89
UBP1Q9NZI7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBP1Q9NZI7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
UBP1Q9NZI7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBP1Q9NZI7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
UBP1Q9NZI7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.58■□□□□ 0.88
UBP1Q9NZI7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
UBP1Q9NZI7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBP1Q9NZI7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
UBP1Q9NZI7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.57■□□□□ 0.88
UBP1Q9NZI7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBP1Q9NZI7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.57■□□□□ 0.88
UBP1Q9NZI7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
UBP1Q9NZI7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBP1Q9NZI7 PGM5P4-201ENST00000421970 445 ntBASIC20.57■□□□□ 0.88
UBP1Q9NZI7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.57■□□□□ 0.88
UBP1Q9NZI7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBP1Q9NZI7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.57■□□□□ 0.88
UBP1Q9NZI7 AC010980.2-201ENST00000587099 1412 ntBASIC20.57■□□□□ 0.88
UBP1Q9NZI7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
UBP1Q9NZI7 OR10C1-204ENST00000622521 1039 ntBASIC20.57■□□□□ 0.88
UBP1Q9NZI7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBP1Q9NZI7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBP1Q9NZI7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBP1Q9NZI7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.57■□□□□ 0.88
UBP1Q9NZI7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBP1Q9NZI7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBP1Q9NZI7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBP1Q9NZI7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
UBP1Q9NZI7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBP1Q9NZI7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.56■□□□□ 0.88
UBP1Q9NZI7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBP1Q9NZI7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBP1Q9NZI7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.56■□□□□ 0.88
UBP1Q9NZI7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBP1Q9NZI7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBP1Q9NZI7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBP1Q9NZI7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.56■□□□□ 0.88
UBP1Q9NZI7 AC100791.3-201ENST00000617619 330 ntBASIC20.56■□□□□ 0.88
UBP1Q9NZI7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBP1Q9NZI7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.56■□□□□ 0.88
UBP1Q9NZI7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.56■□□□□ 0.88
UBP1Q9NZI7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.56■□□□□ 0.88
UBP1Q9NZI7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBP1Q9NZI7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBP1Q9NZI7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBP1Q9NZI7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBP1Q9NZI7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBP1Q9NZI7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBP1Q9NZI7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBP1Q9NZI7 AC099778.1-201ENST00000568593 1911 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms