Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
BLOC1S4Q9NUP1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BLOC1S4Q9NUP1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.55■■□□□ 1.2
BLOC1S4Q9NUP1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
BLOC1S4Q9NUP1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
BLOC1S4Q9NUP1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
BLOC1S4Q9NUP1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.55■■□□□ 1.2
BLOC1S4Q9NUP1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.55■■□□□ 1.2
BLOC1S4Q9NUP1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.55■■□□□ 1.2
BLOC1S4Q9NUP1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.54■■□□□ 1.2
BLOC1S4Q9NUP1 GPX1P1-201ENST00000388829 606 ntBASIC22.54■■□□□ 1.2
BLOC1S4Q9NUP1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.54■■□□□ 1.2
BLOC1S4Q9NUP1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
BLOC1S4Q9NUP1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
BLOC1S4Q9NUP1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.54■■□□□ 1.2
BLOC1S4Q9NUP1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.54■■□□□ 1.2
BLOC1S4Q9NUP1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
BLOC1S4Q9NUP1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
BLOC1S4Q9NUP1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.54■■□□□ 1.2
BLOC1S4Q9NUP1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
BLOC1S4Q9NUP1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
BLOC1S4Q9NUP1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.54■■□□□ 1.2
BLOC1S4Q9NUP1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
BLOC1S4Q9NUP1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.53■■□□□ 1.2
BLOC1S4Q9NUP1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
BLOC1S4Q9NUP1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.53■■□□□ 1.2
BLOC1S4Q9NUP1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
BLOC1S4Q9NUP1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BLOC1S4Q9NUP1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.53■■□□□ 1.2
BLOC1S4Q9NUP1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
BLOC1S4Q9NUP1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
BLOC1S4Q9NUP1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.53■■□□□ 1.2
BLOC1S4Q9NUP1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
BLOC1S4Q9NUP1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.53■■□□□ 1.2
BLOC1S4Q9NUP1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.53■■□□□ 1.2
BLOC1S4Q9NUP1 C2orf69P4-201ENST00000565394 541 ntBASIC22.53■■□□□ 1.2
BLOC1S4Q9NUP1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
BLOC1S4Q9NUP1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
BLOC1S4Q9NUP1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
BLOC1S4Q9NUP1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BLOC1S4Q9NUP1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
BLOC1S4Q9NUP1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.53■■□□□ 1.2
BLOC1S4Q9NUP1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
BLOC1S4Q9NUP1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BLOC1S4Q9NUP1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BLOC1S4Q9NUP1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BLOC1S4Q9NUP1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.52■■□□□ 1.2
BLOC1S4Q9NUP1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BLOC1S4Q9NUP1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.52■■□□□ 1.2
BLOC1S4Q9NUP1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
BLOC1S4Q9NUP1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BLOC1S4Q9NUP1 LSM12P1-201ENST00000411836 588 ntBASIC22.52■■□□□ 1.2
BLOC1S4Q9NUP1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
BLOC1S4Q9NUP1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.52■■□□□ 1.2
BLOC1S4Q9NUP1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
BLOC1S4Q9NUP1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.52■■□□□ 1.2
BLOC1S4Q9NUP1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BLOC1S4Q9NUP1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
BLOC1S4Q9NUP1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
BLOC1S4Q9NUP1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
BLOC1S4Q9NUP1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.51■■□□□ 1.19
BLOC1S4Q9NUP1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.51■■□□□ 1.19
BLOC1S4Q9NUP1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
BLOC1S4Q9NUP1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
BLOC1S4Q9NUP1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
BLOC1S4Q9NUP1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
BLOC1S4Q9NUP1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
BLOC1S4Q9NUP1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.51■■□□□ 1.19
BLOC1S4Q9NUP1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
BLOC1S4Q9NUP1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
BLOC1S4Q9NUP1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
BLOC1S4Q9NUP1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC22.5■■□□□ 1.19
BLOC1S4Q9NUP1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.5■■□□□ 1.19
BLOC1S4Q9NUP1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
BLOC1S4Q9NUP1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.5■■□□□ 1.19
BLOC1S4Q9NUP1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
BLOC1S4Q9NUP1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
BLOC1S4Q9NUP1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
BLOC1S4Q9NUP1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
BLOC1S4Q9NUP1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
BLOC1S4Q9NUP1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
BLOC1S4Q9NUP1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
BLOC1S4Q9NUP1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
BLOC1S4Q9NUP1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.49■■□□□ 1.19
BLOC1S4Q9NUP1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
BLOC1S4Q9NUP1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.49■■□□□ 1.19
BLOC1S4Q9NUP1 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.49■■□□□ 1.19
BLOC1S4Q9NUP1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.49■■□□□ 1.19
BLOC1S4Q9NUP1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.49■■□□□ 1.19
BLOC1S4Q9NUP1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.49■■□□□ 1.19
BLOC1S4Q9NUP1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
BLOC1S4Q9NUP1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
BLOC1S4Q9NUP1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
BLOC1S4Q9NUP1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.48■■□□□ 1.19
BLOC1S4Q9NUP1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms