Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HPS4Q9NQG7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HPS4Q9NQG7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HPS4Q9NQG7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.94■□□□□ 0.94
HPS4Q9NQG7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HPS4Q9NQG7 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.94■□□□□ 0.94
HPS4Q9NQG7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.94■□□□□ 0.94
HPS4Q9NQG7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
HPS4Q9NQG7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HPS4Q9NQG7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HPS4Q9NQG7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HPS4Q9NQG7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HPS4Q9NQG7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HPS4Q9NQG7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HPS4Q9NQG7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HPS4Q9NQG7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HPS4Q9NQG7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HPS4Q9NQG7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HPS4Q9NQG7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HPS4Q9NQG7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HPS4Q9NQG7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.93■□□□□ 0.94
HPS4Q9NQG7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.93■□□□□ 0.94
HPS4Q9NQG7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HPS4Q9NQG7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
HPS4Q9NQG7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.93■□□□□ 0.94
HPS4Q9NQG7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HPS4Q9NQG7 AC133681.1-201ENST00000465482 601 ntBASIC20.93■□□□□ 0.94
HPS4Q9NQG7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.93■□□□□ 0.94
HPS4Q9NQG7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.93■□□□□ 0.94
HPS4Q9NQG7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
HPS4Q9NQG7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.93■□□□□ 0.94
HPS4Q9NQG7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
HPS4Q9NQG7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HPS4Q9NQG7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.93■□□□□ 0.94
HPS4Q9NQG7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HPS4Q9NQG7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.93■□□□□ 0.94
HPS4Q9NQG7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HPS4Q9NQG7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HPS4Q9NQG7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HPS4Q9NQG7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HPS4Q9NQG7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS4Q9NQG7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS4Q9NQG7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.92■□□□□ 0.94
HPS4Q9NQG7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HPS4Q9NQG7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS4Q9NQG7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.92■□□□□ 0.94
HPS4Q9NQG7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HPS4Q9NQG7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.92■□□□□ 0.94
HPS4Q9NQG7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.92■□□□□ 0.94
HPS4Q9NQG7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HPS4Q9NQG7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.92■□□□□ 0.94
HPS4Q9NQG7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS4Q9NQG7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS4Q9NQG7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS4Q9NQG7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HPS4Q9NQG7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HPS4Q9NQG7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.92■□□□□ 0.94
HPS4Q9NQG7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS4Q9NQG7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS4Q9NQG7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS4Q9NQG7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS4Q9NQG7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
HPS4Q9NQG7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HPS4Q9NQG7 AC012618.2-201ENST00000428058 849 ntBASIC20.91■□□□□ 0.94
HPS4Q9NQG7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.91■□□□□ 0.94
HPS4Q9NQG7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HPS4Q9NQG7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS4Q9NQG7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.91■□□□□ 0.94
HPS4Q9NQG7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.91■□□□□ 0.94
HPS4Q9NQG7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
HPS4Q9NQG7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.91■□□□□ 0.94
HPS4Q9NQG7 AC233702.5-201ENST00000584107 538 ntBASIC20.91■□□□□ 0.94
HPS4Q9NQG7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HPS4Q9NQG7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HPS4Q9NQG7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
HPS4Q9NQG7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HPS4Q9NQG7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HPS4Q9NQG7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HPS4Q9NQG7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HPS4Q9NQG7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.9■□□□□ 0.94
HPS4Q9NQG7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HPS4Q9NQG7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HPS4Q9NQG7 AC239809.2-201ENST00000415381 517 ntBASIC20.9■□□□□ 0.94
HPS4Q9NQG7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.9■□□□□ 0.94
HPS4Q9NQG7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HPS4Q9NQG7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HPS4Q9NQG7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.9■□□□□ 0.94
HPS4Q9NQG7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HPS4Q9NQG7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.9■□□□□ 0.94
HPS4Q9NQG7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HPS4Q9NQG7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
HPS4Q9NQG7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HPS4Q9NQG7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HPS4Q9NQG7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HPS4Q9NQG7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
HPS4Q9NQG7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.94
HPS4Q9NQG7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
HPS4Q9NQG7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HPS4Q9NQG7 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.89■□□□□ 0.93
HPS4Q9NQG7 RPS2P55-201ENST00000397318 883 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms