Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.42■□□□□ 0.7
LRTM1Q9HBL6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRTM1Q9HBL6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRTM1Q9HBL6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRTM1Q9HBL6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRTM1Q9HBL6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
LRTM1Q9HBL6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.41■□□□□ 0.7
LRTM1Q9HBL6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.41■□□□□ 0.7
LRTM1Q9HBL6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRTM1Q9HBL6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRTM1Q9HBL6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.41■□□□□ 0.7
LRTM1Q9HBL6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRTM1Q9HBL6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRTM1Q9HBL6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRTM1Q9HBL6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRTM1Q9HBL6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRTM1Q9HBL6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LRTM1Q9HBL6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LRTM1Q9HBL6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRTM1Q9HBL6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LRTM1Q9HBL6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
LRTM1Q9HBL6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 AC034268.1-201ENST00000441047 882 ntBASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 TERF1P5-201ENST00000477545 1207 ntBASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 AC092666.2-201ENST00000613287 246 ntBASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 AC010536.3-201ENST00000620306 533 ntBASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRTM1Q9HBL6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LRTM1Q9HBL6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.39■□□□□ 0.7
LRTM1Q9HBL6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 PGM5P4-201ENST00000421970 445 ntBASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 AL591742.1-201ENST00000604433 565 ntBASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
LRTM1Q9HBL6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LRTM1Q9HBL6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRTM1Q9HBL6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRTM1Q9HBL6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRTM1Q9HBL6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRTM1Q9HBL6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRTM1Q9HBL6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRTM1Q9HBL6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRTM1Q9HBL6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.38■□□□□ 0.69
LRTM1Q9HBL6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms