Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 LIPT1-201ENST00000393471 1289 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 USP9YP20-201ENST00000419224 558 ntBASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 MTCO3P1-205ENST00000422088 832 ntBASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 AL138878.2-201ENST00000440581 1241 ntBASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 USP9YP29-201ENST00000445112 563 ntBASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 MTCYBP3-201ENST00000445588 1137 ntBASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 AC093714.1-201ENST00000470532 1257 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 WDR78-207ENST00000488333 613 ntTSL 3 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 LINC02116-201ENST00000509455 493 ntTSL 2 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 AC233290.1-201ENST00000553021 1186 ntBASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 HNRNPA3P11-201ENST00000564298 934 ntBASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 LINC01238-205ENST00000567549 1107 ntBASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 AC005229.3-201ENST00000603438 323 ntBASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 SPP1-203ENST00000395080 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 CREM-216ENST00000429130 1476 ntTSL 5 BASIC12.45□□□□□ -0.42
KRTAP3-3Q9BYR6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 C1GALT1C1-201ENST00000304661 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 CD2-201ENST00000369477 478 ntTSL 2 BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 CA5BP1-204ENST00000380336 843 ntTSL 5 BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 GULP1-205ENST00000409805 983 ntTSL 2 BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 AL008629.1-201ENST00000438615 184 ntBASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 DUTP3-201ENST00000450025 415 ntBASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 RPS7P7-201ENST00000463499 571 ntBASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 VTA1P2-201ENST00000520205 911 ntBASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 AC008676.3-201ENST00000521237 435 ntBASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 AC027369.2-201ENST00000528030 440 ntBASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 AC006518.2-201ENST00000542513 940 ntBASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 HIST1H4H-204ENST00000635491 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC12.44□□□□□ -0.42
KRTAP3-3Q9BYR6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 FAM153A-202ENST00000393518 1138 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 RBBP4P5-201ENST00000398583 1266 ntBASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 AC009518.2-201ENST00000418056 731 ntBASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 ELOCP11-201ENST00000436690 332 ntBASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 ELOCP16-201ENST00000444494 332 ntBASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 AL929288.2-201ENST00000446368 407 ntBASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 AL118496.2-201ENST00000448300 230 ntBASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 AC092669.1-202ENST00000449673 905 ntTSL 3 BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 RPL7P61-201ENST00000451721 751 ntBASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 LINC02505-201ENST00000505298 788 ntTSL 5 BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 TRPC5OS-202ENST00000612026 1043 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 AC079395.3-201ENST00000615161 484 ntBASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 AL359715.5-201ENST00000623431 443 ntBASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 AC025262.3-201ENST00000623666 360 ntBASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 AC092608.3-201ENST00000625017 386 ntBASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
KRTAP3-3Q9BYR6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms