Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HDHD3Q9BSH5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 AC091799.1-201ENST00000422823 811 ntBASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 AC005837.3-201ENST00000612163 286 ntBASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 AL691432.2-201ENST00000607222 2038 ntBASIC17.03■□□□□ 0.32
HDHD3Q9BSH5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.02■□□□□ 0.32
HDHD3Q9BSH5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDHD3Q9BSH5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
HDHD3Q9BSH5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDHD3Q9BSH5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.02■□□□□ 0.32
HDHD3Q9BSH5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HDHD3Q9BSH5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HDHD3Q9BSH5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDHD3Q9BSH5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
HDHD3Q9BSH5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.02■□□□□ 0.32
HDHD3Q9BSH5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HDHD3Q9BSH5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDHD3Q9BSH5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDHD3Q9BSH5 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HDHD3Q9BSH5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HDHD3Q9BSH5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HDHD3Q9BSH5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HDHD3Q9BSH5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.02■□□□□ 0.31
HDHD3Q9BSH5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
HDHD3Q9BSH5 KRT8P36-201ENST00000489121 1440 ntBASIC17.02■□□□□ 0.31
HDHD3Q9BSH5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.02■□□□□ 0.31
HDHD3Q9BSH5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HDHD3Q9BSH5 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HDHD3Q9BSH5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HDHD3Q9BSH5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HDHD3Q9BSH5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17■□□□□ 0.31
HDHD3Q9BSH5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HDHD3Q9BSH5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HDHD3Q9BSH5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms