Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 AC245052.3-201ENST00000450182 901 ntBASIC19.68■□□□□ 0.74
EBF4Q9BQW3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.68■□□□□ 0.74
EBF4Q9BQW3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
EBF4Q9BQW3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EBF4Q9BQW3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EBF4Q9BQW3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
EBF4Q9BQW3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EBF4Q9BQW3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
EBF4Q9BQW3 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.67■□□□□ 0.74
EBF4Q9BQW3 BX119927.1-201ENST00000636596 1552 ntBASIC19.67■□□□□ 0.74
EBF4Q9BQW3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.67■□□□□ 0.74
EBF4Q9BQW3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.67■□□□□ 0.74
EBF4Q9BQW3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EBF4Q9BQW3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.67■□□□□ 0.74
EBF4Q9BQW3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
EBF4Q9BQW3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EBF4Q9BQW3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
EBF4Q9BQW3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.67■□□□□ 0.74
EBF4Q9BQW3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EBF4Q9BQW3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
EBF4Q9BQW3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.67■□□□□ 0.74
EBF4Q9BQW3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EBF4Q9BQW3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EBF4Q9BQW3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 TPRG1LP1-201ENST00000598702 760 ntBASIC19.66■□□□□ 0.74
EBF4Q9BQW3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
EBF4Q9BQW3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.65■□□□□ 0.74
EBF4Q9BQW3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.65■□□□□ 0.74
EBF4Q9BQW3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EBF4Q9BQW3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
EBF4Q9BQW3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EBF4Q9BQW3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EBF4Q9BQW3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EBF4Q9BQW3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EBF4Q9BQW3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EBF4Q9BQW3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.65■□□□□ 0.74
EBF4Q9BQW3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EBF4Q9BQW3 AC027682.1-201ENST00000562846 899 ntBASIC19.65■□□□□ 0.74
EBF4Q9BQW3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EBF4Q9BQW3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
EBF4Q9BQW3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EBF4Q9BQW3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EBF4Q9BQW3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
EBF4Q9BQW3 KRT16P2-201ENST00000414673 1423 ntBASIC19.65■□□□□ 0.74
EBF4Q9BQW3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
EBF4Q9BQW3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EBF4Q9BQW3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
EBF4Q9BQW3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
EBF4Q9BQW3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
EBF4Q9BQW3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
EBF4Q9BQW3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
EBF4Q9BQW3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
EBF4Q9BQW3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms