Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC027702.1-201ENST00000563810 1770 ntBASIC21.18■□□□□ 0.98
CDCA3Q99618 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CDCA3Q99618 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDCA3Q99618 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDCA3Q99618 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDCA3Q99618 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDCA3Q99618 HLA-G-202ENST00000376815 851 ntBASIC21.17■□□□□ 0.98
CDCA3Q99618 HLA-G-203ENST00000376818 1127 ntBASIC21.17■□□□□ 0.98
CDCA3Q99618 KRT18P57-201ENST00000443599 1254 ntBASIC21.17■□□□□ 0.98
CDCA3Q99618 AC010947.1-201ENST00000623454 693 ntBASIC21.17■□□□□ 0.98
CDCA3Q99618 CR392000.1-201ENST00000624770 1228 ntBASIC21.17■□□□□ 0.98
CDCA3Q99618 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CDCA3Q99618 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDCA3Q99618 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDCA3Q99618 KRT16P1-201ENST00000399124 1418 ntBASIC21.17■□□□□ 0.98
CDCA3Q99618 AC073508.3-201ENST00000619697 1419 ntBASIC21.17■□□□□ 0.98
CDCA3Q99618 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDCA3Q99618 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDCA3Q99618 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CDCA3Q99618 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.17■□□□□ 0.98
CDCA3Q99618 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.17■□□□□ 0.98
CDCA3Q99618 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.17■□□□□ 0.98
CDCA3Q99618 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDCA3Q99618 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDCA3Q99618 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.17■□□□□ 0.98
CDCA3Q99618 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA3Q99618 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA3Q99618 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.16■□□□□ 0.98
CDCA3Q99618 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.16■□□□□ 0.98
CDCA3Q99618 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.16■□□□□ 0.98
CDCA3Q99618 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA3Q99618 SLC25A3P1-201ENST00000443844 931 ntBASIC21.16■□□□□ 0.98
CDCA3Q99618 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.16■□□□□ 0.98
CDCA3Q99618 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA3Q99618 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.16■□□□□ 0.98
CDCA3Q99618 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.16■□□□□ 0.98
CDCA3Q99618 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.16■□□□□ 0.98
CDCA3Q99618 MIR2861-201ENST00000636310 90 ntBASIC21.16■□□□□ 0.98
CDCA3Q99618 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA3Q99618 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA3Q99618 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.16■□□□□ 0.98
CDCA3Q99618 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.16■□□□□ 0.98
CDCA3Q99618 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA3Q99618 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA3Q99618 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA3Q99618 CYP2D8P-201ENST00000433633 1490 ntBASIC21.15■□□□□ 0.98
CDCA3Q99618 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA3Q99618 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA3Q99618 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA3Q99618 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA3Q99618 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA3Q99618 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA3Q99618 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA3Q99618 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.15■□□□□ 0.98
CDCA3Q99618 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA3Q99618 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.15■□□□□ 0.98
CDCA3Q99618 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.15■□□□□ 0.98
CDCA3Q99618 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.15■□□□□ 0.98
CDCA3Q99618 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA3Q99618 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CDCA3Q99618 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.15■□□□□ 0.98
CDCA3Q99618 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA3Q99618 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
CDCA3Q99618 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
CDCA3Q99618 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.14■□□□□ 0.98
CDCA3Q99618 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.14■□□□□ 0.97
CDCA3Q99618 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.14■□□□□ 0.97
CDCA3Q99618 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.14■□□□□ 0.97
CDCA3Q99618 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA3Q99618 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA3Q99618 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA3Q99618 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA3Q99618 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA3Q99618 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.14■□□□□ 0.97
CDCA3Q99618 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.14■□□□□ 0.97
CDCA3Q99618 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA3Q99618 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA3Q99618 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA3Q99618 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.14■□□□□ 0.97
CDCA3Q99618 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA3Q99618 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CDCA3Q99618 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA3Q99618 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA3Q99618 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.14■□□□□ 0.97
CDCA3Q99618 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.14■□□□□ 0.97
CDCA3Q99618 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.13■□□□□ 0.97
CDCA3Q99618 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CDCA3Q99618 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.13■□□□□ 0.97
CDCA3Q99618 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CDCA3Q99618 AL390955.1-201ENST00000428694 934 ntBASIC21.13■□□□□ 0.97
CDCA3Q99618 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDCA3Q99618 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.13■□□□□ 0.97
CDCA3Q99618 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.13■□□□□ 0.97
CDCA3Q99618 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.13■□□□□ 0.97
CDCA3Q99618 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CDCA3Q99618 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDCA3Q99618 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDCA3Q99618 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDCA3Q99618 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDCA3Q99618 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms